Gene Dfer_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1022 
Symbol 
ID8224592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1202090 
End bp1202674 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content53% 
IMG OID644928883 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003085436 
Protein GI255034815 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0347581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.646556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAT CGCTAAAATT GCTTGAATCT GTCGTACGTG CCATTTATCC GCTCGACGAA 
GCTGATTGGA AGGCCTTGTC GGCCATTTGG AAACCGTTTG AAGCGCGGCG CAAGGAAATC
ATCACGGCGG CCGGAGAAAC GGAGCGATAC CTGTACTTCG TAACCGACGG CGTGCAGCGC
ATTTACTACC TCGACGACCA GGACCGCGAA GCGACCATAG CATTTACCTA CCGGCCATCA
TTCGGAGGCA TTATCGATTC GGTGCTGATG GAAGTGCCGT CGCGCTACTA TTACGAAACG
CTCACGCCCT CGCGTTTCAT CCGGACACCT TACAGCGATT TCCGCGATGT GGCCATGCAG
CGGCCGGCTA TCGAGCGAAT GCTGCGTGCC GGCATGACGC AGACATTGTC GGGCATTCTC
GAACGGTTGG TGGAAGTTCA ATGCTTTTCA TCGGAAGAAA AGTTCAAAAA CCTGCTCAAA
CGCAGTCCGC ACATCCTCCA ACTTGTCCCG CACAAATACC TAGCGAATTA CCTGGGCATC
GACGCGACCA ATTTCAGCAA GCTGTTGAAT AAGGTGCGGA TTTGA
 
Protein sequence
MEESLKLLES VVRAIYPLDE ADWKALSAIW KPFEARRKEI ITAAGETERY LYFVTDGVQR 
IYYLDDQDRE ATIAFTYRPS FGGIIDSVLM EVPSRYYYET LTPSRFIRTP YSDFRDVAMQ
RPAIERMLRA GMTQTLSGIL ERLVEVQCFS SEEKFKNLLK RSPHILQLVP HKYLANYLGI
DATNFSKLLN KVRI