| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1021 |
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| Symbol | |
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| ID | 8224591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1199825 |
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| End bp | 1202062 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928882 |
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| Product | putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB |
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| Protein accession | YP_003085435 |
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| Protein GI | 255034814 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00530094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.902731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGTT TATCTCAGTC AGTCAGTACA GGGAGACTCA TCATAGTCGC TTACCGGTTA
CCTTTCAAGG TTGTCCGGGA CGGTGATGTT TCCCGCCTAT TTCAAAATTC CGGCGGTCTG
GTATCGGCGG TGCTTTCGCT GGTGAAAGAT CAGGAAAGTC AGGCCTTCGA CGCCCATCAG
AAAATCCAGT GGATCGGTTT TTCCGAGAAC ACGCCCGAAG AGCTAGAAGG GCAGTCCATG
GAAAATGAAA ATTTCCACGC TCACCCGGTT TTCATCCCCG CCGACCTCAA CGAAAATTAT
TATGAAGGCT TCTGTAACAA CCTGATATGG CCGCTGTGCC ATTACTTCCC GTCGCTCGCG
CAGTTTCACG ATGTGTACTT CGCCGCCTAT CAGGAAGCGC ACCAGCTCTT CTTCGAAAAG
GTGAAGGAAG TGATCCGCCC CGGAGATGTG GTTTGGGTGC AGGACTACCA GCTCATGCTC
CTGCCGCAGA TGATCCGGAG CGCTTTTCCC GAGAATAAAA TCGGCTTCTT TTTTCACATT
CCTTTTCCTT CGTTCGAGAT TTTCAGGCTG CTGCCCGTGA CGTGGCGGAA GGCGATTGTC
GACGGCATTC TCGGCGCCGA TGTGGTGGGT TTTCATACCA ACGATTATGT GGAGTATTTC
CTGAAAGCGG CGAGACTTGT CTCCGAATTG GGGAATAAAT TGCATTACAT CAACCTCGGC
AACCGGATCG TGAAAGTGGA TTCTTTTCCG ATCAGCATCG ACTTCGATAA ATTCAACGAC
GCCTACGACG ATCCCGATGT AACCGCGGCG CGTTCCGACG CCCGGCAGTC GCTCAAAGAG
AAGATCATTT TTTCCGTCGA CCGCCTCGAT TATTCCAAAG GCATCATCCA CCGCTTGCAG
GGCTACCAGC GCTTCCTCGA ACAAAATCCC GAATGGCATG AAAAAGTGTC GTTTGTGATG
GTGGTGGTTC CCTCGCGCGA CACCATTGAA CAATACCAGC AAATGAAGTC GGATATAGAC
CAGACGGTCG GCAAAATCAG CGCCGATTAC GGGACTATTT CCTGGCAGCC GATTGTATAC
CAATATCGAT CGATGCCGTA TCATGAACTC GTAGGCATGT ACACTGCAAG CGATGTGGCG
CTCATTACGC CCGTGCGCGA CGGTATGAAC CTCGTGTGCA AGGAGTATGT AGCCAGCAGG
CAGGATGGTC GCGGCGTGCT GATACTCAGT GAAATGGCCG GGGCTGCCGC CGAGTTGGGC
GAAGCGCTGA TCATTAATCC ACTTGACAGG CAGGATATCG CCGACGCGAT CAAGACGGCC
TTTGAAATGC CCGACGACGA ACAAAACAAA AGAATGGAGG CCATGCGCGA GCGGATCAGA
GATTACGACG TATTTGCATG GACCAGTGAC TTTTTTACCC AAATGACAAT GCTTGAACTA
GAACACGACC GCCTGCGCCA GGTTTTCCTG AACAACAAGG GAATCGACGC GATACGGCAC
GCTTACCAAT CGTCCAACAA CAGAATCCTC TTTTTCGACT ACGACGGCAC GCTCGCACCG
ATCGTGCCCG ACCCGGCTCA GGCCATCATG AGCGAGGACA TGAAGAAACT GCTCAACGAC
ATTGCGAAAC GCGATACCGT GGTGATCGTA AGCGGCCGCG ACCGCAACTT TCTCGGCAAG
TTGTTCAGTG ATCTGCCGGT TCACATGATC GCCGAACACG GCGCGTTGGT GAAAGCCAAG
GATTCGGACG AATGGCAGCT GAATGAGGGT TACGAAGAAA ACTGGAAGGA CGGCATTCGT
CCGATGATGC AGATCTACGC AAAACGCTGC CCCGGCGCAT TTGTGGAAGA AAAAGAGACT
TCGCTGGCGT GGCATTACCG CACCGCCGAC GACAAGGAAT ATGCCAGCCG GCGCGCGCAG
GAGCTGCTCT GGCAACTCAA AAATTACATT CAGCCCGAAC TCAATTTGCA GGTAATCGAC
GGTAATAAGG TGGTGGAAGT TAAAAAGACC GCATTCAACA AAGGAACGGC TACCCGCACA
TTTGTTGAGT CCGGCGACTA TGATTTCGTA CTGGCTATCG GTGACGATAC CACCGACGAG
GACATGTTCG AAGCGCTGCC CGAAACGTCG TTTACCGTCA AAATCGGCGA CGACCTGTCG
GCTGCGCGGA ACCACATCCG CAGCCAGGAC GAAGTGTTTC ATTTCCTTCA TTTTATGGTA
TCGTCGGTAG GCGAGTAG
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| Protein sequence | MESLSQSVST GRLIIVAYRL PFKVVRDGDV SRLFQNSGGL VSAVLSLVKD QESQAFDAHQ
KIQWIGFSEN TPEELEGQSM ENENFHAHPV FIPADLNENY YEGFCNNLIW PLCHYFPSLA
QFHDVYFAAY QEAHQLFFEK VKEVIRPGDV VWVQDYQLML LPQMIRSAFP ENKIGFFFHI
PFPSFEIFRL LPVTWRKAIV DGILGADVVG FHTNDYVEYF LKAARLVSEL GNKLHYINLG
NRIVKVDSFP ISIDFDKFND AYDDPDVTAA RSDARQSLKE KIIFSVDRLD YSKGIIHRLQ
GYQRFLEQNP EWHEKVSFVM VVVPSRDTIE QYQQMKSDID QTVGKISADY GTISWQPIVY
QYRSMPYHEL VGMYTASDVA LITPVRDGMN LVCKEYVASR QDGRGVLILS EMAGAAAELG
EALIINPLDR QDIADAIKTA FEMPDDEQNK RMEAMRERIR DYDVFAWTSD FFTQMTMLEL
EHDRLRQVFL NNKGIDAIRH AYQSSNNRIL FFDYDGTLAP IVPDPAQAIM SEDMKKLLND
IAKRDTVVIV SGRDRNFLGK LFSDLPVHMI AEHGALVKAK DSDEWQLNEG YEENWKDGIR
PMMQIYAKRC PGAFVEEKET SLAWHYRTAD DKEYASRRAQ ELLWQLKNYI QPELNLQVID
GNKVVEVKKT AFNKGTATRT FVESGDYDFV LAIGDDTTDE DMFEALPETS FTVKIGDDLS
AARNHIRSQD EVFHFLHFMV SSVGE
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