| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1013 |
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| Symbol | |
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| ID | 8224583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1190903 |
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| End bp | 1192387 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928874 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085427 |
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| Protein GI | 255034806 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.164224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.518942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CAACCATACT TCTTCTAACC AGCCTGCTCT TCACCGGCGC TGGTTGCAGC
GATTACCTTG ACGAGGATAC GAGAGGGCTT TTGTACGGGC CGAATGTGCT TTCCACGCAG
GACGGTCTTG AATCGGCATT GACGGGAGCG TATAAGGGGC TGGGCAACCA GTGGTCCTAT
GGATTTCTGC ACCCGTCGGC CAATGCAGCC GTGCTGGGCG CCGACGACGT TACCACGCAC
CCGGCGAGCA ACAAGGCCGA CTGGCGCGAG TTCGATCAGT TCAATGTGTC GACGACCAAC
CAGCGTTCCA ATGCCGTTTA CAATGGTTGC TATAAAGCCA TTCAGGGAGC GAACAATGTG
ATCAACAACT GGGAAAAAAC GCAGGGTACC AAAGCTACGA TCGACATTAT CATGGGCGAA
GCGCATTTCA TCCGCGCATT TTCCTACTAC TGGCTCACGC GGTTCTGGGG GAACATCCCA
CTCGTTCTCG CAGGAGAGTA TTCGGATGAG TTGTTGACGG TCAAAAAATC GACGCCGCAG
GAAGTGTACG ACCTCATTGT GGCCGACCTC AAAATTGCCG AAACCAACCT TCCCAACGCG
AAGCGTGATC CGGGACGGCC CAACAAAGGT GCCGCGAAGG CTTTCCTGGC CGATGTGTAC
CTGACGATGG CAGGCTGGCC TTTGAAACAA ACCGACAAAT ACGACCTCGC CGCCGCGAAA
GCGAAAGAGG TGATCGACAA TGCGTCGGCT TATGGTTTCG AGCTGCTGCC CACGTTCGCG
GCCGTTTTCG ACAACGATCC GGCGTCGCCG GGCACCCGCG AGGCGGTGTT CCAGATCAGC
GGCTACCTGG GCGGCTCAGG CACGGCCAAT GCGACTTACG GCAACACCAC CATGCCCGGT
GAGGAAGGCG GCTGGGACGA TATGTTCGCC GAGCTGAACT TCTTCCGCGA TTTCCCCGCA
GGACCGCGCA AAGACGCTAC CTTCCGCACG GAATTCGGCC TCGGCGCGAC CAAAATCCCC
TGGCAGAACA GCCTTACCAA GCATCCGTAT TATCAGAAAT GGTATATCAA GGGCAATATC
GTGACGTCGA GCATTTCGCT GCCGTCGGTA ATGATGCGTT ATCCGCACGT GCTCACGATT
TACGCGGAGG CCAAAGCACG CGGCACCGGC GGCCCCGACC AGGCAGCCTA CGATGCGCTC
AACAAAGTGC GCCTGCGCGG TTGGGCGGCA GGTACCAAGG CACTCGCTCC GGCAGATGGC
CTCACGGCTG CGCAGTTTGC CGATGAAGTG GTGCAGGAGC GCGCGTGGGA ATTTGCCTGC
GAACGTACCC GCTGGTTCGA TCTCGTGCGG TTGGAGAGGG TTGAGGAAGC CAATGCGAAG
AAAAGCGCCG ACGATTTGCA GCCGATCAAA CCGATCGTTA AAGCCAATTA CTGGTTCCCG
CTGCCATACA CCGACACGTC CATTAACCCG AATCTGAATC AGTAA
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| Protein sequence | MKKTTILLLT SLLFTGAGCS DYLDEDTRGL LYGPNVLSTQ DGLESALTGA YKGLGNQWSY
GFLHPSANAA VLGADDVTTH PASNKADWRE FDQFNVSTTN QRSNAVYNGC YKAIQGANNV
INNWEKTQGT KATIDIIMGE AHFIRAFSYY WLTRFWGNIP LVLAGEYSDE LLTVKKSTPQ
EVYDLIVADL KIAETNLPNA KRDPGRPNKG AAKAFLADVY LTMAGWPLKQ TDKYDLAAAK
AKEVIDNASA YGFELLPTFA AVFDNDPASP GTREAVFQIS GYLGGSGTAN ATYGNTTMPG
EEGGWDDMFA ELNFFRDFPA GPRKDATFRT EFGLGATKIP WQNSLTKHPY YQKWYIKGNI
VTSSISLPSV MMRYPHVLTI YAEAKARGTG GPDQAAYDAL NKVRLRGWAA GTKALAPADG
LTAAQFADEV VQERAWEFAC ERTRWFDLVR LERVEEANAK KSADDLQPIK PIVKANYWFP
LPYTDTSINP NLNQ
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