| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1011 |
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| Symbol | |
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| ID | 8224581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1186438 |
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| End bp | 1187685 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644928872 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003085425 |
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| Protein GI | 255034804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.635403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.302413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA ACCCTAAATC TACCGCATTG TCCCGCCGCG CGGCCATCCA GTCGGTGCTC
GGCATTGCCG CGACGGGCAC CATGCTGCTG CCGAAATCTT CTTACGCCGC CGCGCCGACG
CCGTTCCAGG CCTATGGCAA GGTGAAGATC ACCAAACTGG AAACATTCCT GGTGAAGCCC
CGCTGGATTT TTCTCAAAAT CCACACCGAC GCGGGCATTG TCGGCCTCGG TGAACCGTTG
CTCGAAGGCC GCGCCCTGAC CATCCAGACG GCCATTAAAG AAGTGGAGCC GTACCTCGTG
GGCAAGGACC CGCGCGCGGT GGTGCACCAT TGGCAGGCTA TTTACCGCCA CGCGTTCTAC
CGCGGCGGCC CCATTCTCAC CAGCGCCCTG AGCGGCATCG ATCAGGCATT GTGGGACATT
AAGGGCAAGC TCCTGGGCGT ACCTGTGCAC GAGCTGCTCG GAGGGCCCAC CCGCGACCGC
GTCCGGATTT ACGGGCGGGC ATCCAATGCC GAGGACATGA AAAAGCGGAA GGCCGAGGGG
TATACGATCA TCAAAACCGG CGTGGCGAAA AAGAACCCGG CCAACATCGT GGAAAACCCG
GCATTCATCA AATTCGCGTC CGACAATTTT GCTTCGCTGC GCGAGGCGGG CGGCCCGGAA
ATGGATATCG CCATCGACTT CCACGGCGCG GTGCCGCAGC AGACTTCCAA GGTGCTGATC
AAAGAATTGG AACAGTACCA GCCGTTTTTT GTCGAGGAAC CATGCCAGGC GCAGAATGTG
GACACGCTGG TGGACATTGC CAGAGGCACG CACATTCCGA TTGCCACAGG AGAGCGGATA
TTCACCAAAT GGGGCTTCCG CGAAATCCTG GAAAAAGGCG CGGCCAGCAT TATCCAGCCC
GATTTGTGCC ACGCCGGCGG CATTACCGAA GGGCGTATCA TCGCCGGGAT GGCCGAGGCC
TACTACATTC CCATTGCCCC GCACAACCCG ATGGGCCCCA TTTCCCTCGC AACCGGTCTG
CAACTGGCCG CCAGCGTGCC CAATTTCCTC GTGCAGGAGC AGGTGACGCT CGGTGAAGGT
TATCTCAAAG AGCCATTCAA ACTGCAAAAA GACGGCACGG TGATGGTACC CACCAAACCC
GGCCTCGGCG TCGAACTCGA TGAGGACGCA TTGAAAGACA AAATAGGCCA CGACTGGAAA
AACCCTGAAA GCTATAACGC GCTGGACGGG TCGGTGGTGG ACTGGTGA
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| Protein sequence | MKTNPKSTAL SRRAAIQSVL GIAATGTMLL PKSSYAAAPT PFQAYGKVKI TKLETFLVKP
RWIFLKIHTD AGIVGLGEPL LEGRALTIQT AIKEVEPYLV GKDPRAVVHH WQAIYRHAFY
RGGPILTSAL SGIDQALWDI KGKLLGVPVH ELLGGPTRDR VRIYGRASNA EDMKKRKAEG
YTIIKTGVAK KNPANIVENP AFIKFASDNF ASLREAGGPE MDIAIDFHGA VPQQTSKVLI
KELEQYQPFF VEEPCQAQNV DTLVDIARGT HIPIATGERI FTKWGFREIL EKGAASIIQP
DLCHAGGITE GRIIAGMAEA YYIPIAPHNP MGPISLATGL QLAASVPNFL VQEQVTLGEG
YLKEPFKLQK DGTVMVPTKP GLGVELDEDA LKDKIGHDWK NPESYNALDG SVVDW
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