Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1009 |
Symbol | |
ID | 8224579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1184109 |
End bp | 1185146 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644928870 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003085423 |
Protein GI | 255034802 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.285853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG CATCGCTCAA AGATATTGCA CAACAAGCGG GCGTTTCCAC GGCCCTGGTT TCCTACGTCC TCAACGGCAA AGAAAAGGAA ACCAGGGTGG GAGAGGCCAT CGCCCAAAAA ATCAGGCAGA TAGCCAAAGA ACTGAACTAT CAGCCTAATC ATCTTGCCAA AAGCCTCAGA AGCGGCAAGA CGCACACCAT CGGGCTCATC ATAGCCGATA TTTCCAACCC GTTTTTCGCC AACATCGCCC GCGTTGTGGA GGACGAGGCC AAGCGCAACG GGTACACGGT CATCATCGGC AGCTGCGACG AGCACGCGGA AAAATCGTGG GATTTGCTGA ATGTCCTCAT CAACCGGCAG GTGGATGGCT TCATCATCGT GTCCTGCGAA GGCTCCGAAA ACCAGGTGCA TTATCTGAAA GAGCGTAACA TTCCTTTTGT ATTGCTGGAC CGCCATTTCC CCGAAATCCA GACCGATTTC GTGGCTACGA ACAATTACAA AGCCTCCTAC GACGCGGGCG TGCACCTCAT CCAAAGCGGC TACGAACGGA TCGGCATCAT GGCCTACAAG TCCAATATGT ACCACATGGA AGAACGTGTG CGCGGGTACA AACACGCCCT ACGCGACAAC AACATCGAGT TCCGCGACGC CTGGCTGAAA GAAGTCCATT TCGAAACGAT GGACAGCGAG GTAAGGACAG CTATCGACGA AGTACTGGCC TCCGACCAGC GTGTGCAAGC CATGATATTC GCCACTTACG GCCTGGCCAT CAATGCATTG AAATATATCA ATGAGCTGCG GTTAAAAGTA CCGTCCGACC TGGCGATCGT CAGTTTCGGG CAGGCGGAGG TTTTCGACCT CTACTATTGC CCGATCACTT ACGTGCGCCA GCCTCTTGAA ATGCTGGGCA AAACGTCCGT CGAGTTTCTT CTGAAAAAAC TGAAAAACCC GGAGGAGGGC ATGAAGCAGA TTTTAATGGA AGCCAAGCTT ATCGCCCGTG AATCGTCAAA GGCGAAAACC GGCGCATTGG AAGGTTGA
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Protein sequence | MKKASLKDIA QQAGVSTALV SYVLNGKEKE TRVGEAIAQK IRQIAKELNY QPNHLAKSLR SGKTHTIGLI IADISNPFFA NIARVVEDEA KRNGYTVIIG SCDEHAEKSW DLLNVLINRQ VDGFIIVSCE GSENQVHYLK ERNIPFVLLD RHFPEIQTDF VATNNYKASY DAGVHLIQSG YERIGIMAYK SNMYHMEERV RGYKHALRDN NIEFRDAWLK EVHFETMDSE VRTAIDEVLA SDQRVQAMIF ATYGLAINAL KYINELRLKV PSDLAIVSFG QAEVFDLYYC PITYVRQPLE MLGKTSVEFL LKKLKNPEEG MKQILMEAKL IARESSKAKT GALEG
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