| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0996 |
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| Symbol | |
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| ID | 8224566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1164774 |
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| End bp | 1165919 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928857 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003085410 |
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| Protein GI | 255034789 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.613489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.215198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACCAT ACATTGTTCT ATGCGCCGCA CTTTGGACCT GCCTCTCGTG CAGCACCGGC
GGCCAGCAGG CACCCGACGC CGAAGCGGCC AGTACACCCG ATTCGGTCAT GCGCCGCGTT
TCATTCGATC CGGCACAAAT CCGCAACGTC GGCATTGAAG TGGGAACGCC CGTTTTAAAA
AATATCCCGG GTGTAGTTAC GCTTCAAGGC AAAATCGACG TGCCGCCGCA AAGCACGATC
AGCCTGAGCT TTCCGCTGGG CGGGTATCTC AAATCCACGA CCATGCTGCC GGGAATGCGC
GTCAGAAAAG GACAGGTGCT GGCAGAACTG GAAGATATGC AGTTTATCCA ACTCCAACAG
GATTACCTCA CAGCGCGTGA AAAGTTGGAA CTGGCCCAAA GCGAATTTGC CCGGCAAGAG
GACCTGAATG TGGGCAAAGC GAGCAGCGAC AAGGTTTTGC AGCAGGCTAA GGCCGAAATG
GAAACGCAGC GGATTCTCAT GAACGCCCTG GCGCGCAAGC TGGAAGTGAT CGGCATCGCA
CCCGCCAAAC TGAGCGCGGA CCATATTTCG AAAACAGTCC CGATTCTTTC GCCGATCGAC
GGTTTCGTAT CGAGGGTGAA CGTGAATGTA GGCAAATACA CCGCGCCCAC GGACATGCTG
TTCGAGCTCG TCGACCCGAA AGATATTCAT CTTGCATTGC ATGTATTCGA AAAGGATTTG
CATACATTAT CTGTCGGCCA GCGCGTGACG GCCTACACCA ATGGTGACCC CTCCCGGAAA
TTCACAGCCA AAATCATCCT CATTGGAAAA AGCCTCACCG ACGACCGTTT GGCGGAAGTA
CATTGCCATT TTGATCGGTA CAGCCCGTCG CTTGTGCCCG GGATGTTTAT GAACGGCGAA
GTATCCGTGT CCGGCAGCAA AGCCATGTCG GTGCCCGAAG ATGCCGTGGT TCGCTGGGAA
AACAAATCGT TCGTTTTCGT GGAGCGGGAA TCGGGTGAGT TCGAAATGGT GGAAATCGTG
CCGGGCGGGA TAATGGATGG TTTTCAGCAG ATCAGCGCGG CAGGCATCGA CGCAGCGTCG
AGAGTGGTCA TTCGCAATGC TTATTCCCTT TTAATAAAGG CAAAGAATGC CGGTGATGAA
GGTTGA
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| Protein sequence | MKPYIVLCAA LWTCLSCSTG GQQAPDAEAA STPDSVMRRV SFDPAQIRNV GIEVGTPVLK
NIPGVVTLQG KIDVPPQSTI SLSFPLGGYL KSTTMLPGMR VRKGQVLAEL EDMQFIQLQQ
DYLTAREKLE LAQSEFARQE DLNVGKASSD KVLQQAKAEM ETQRILMNAL ARKLEVIGIA
PAKLSADHIS KTVPILSPID GFVSRVNVNV GKYTAPTDML FELVDPKDIH LALHVFEKDL
HTLSVGQRVT AYTNGDPSRK FTAKIILIGK SLTDDRLAEV HCHFDRYSPS LVPGMFMNGE
VSVSGSKAMS VPEDAVVRWE NKSFVFVERE SGEFEMVEIV PGGIMDGFQQ ISAAGIDAAS
RVVIRNAYSL LIKAKNAGDE G
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