| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0995 |
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| Symbol | |
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| ID | 8224565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1160401 |
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| End bp | 1164765 |
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| Gene Length | 4365 bp |
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| Protein Length | 1454 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928856 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003085409 |
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| Protein GI | 255034788 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.668316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA GAATCATCAG GTTCTCCGTG GAGAACAAGC TGGTGATCGG GATCTTCATG
GTGCTGTGGG TTGCCTTCGG CATTTATGAA CTTACCCGGT TGCCCATTGA TGCCGTTCCC
GACATCACCA ATAATCAGGT TCAAATTATT ACAACCGCTC CGTCGCTCGG TACCGAAGAC
GTGGAGCGGC TCATCACATT TCCGATCGAA CAGGCCACCG CCAATATCCC CGGCCTCAAA
GAAAGCCGGA GCATGTCGCG GTTCGGGCTA TCGCTCGTGT CGATCGTTTT CGATGACGAT
TCGGACATTT ACTGGGCACG GCAGCAGGTT ACCGAGCGGC TTTCGCAGGT GGAAATGCCC
GAAACGGCCG GCAAACCCGA ACTCGCGCCC GTCACCACCG GCCTGGGCGA GATTTACCAG
TATGTAGTGA AACCTAAAAA GGGTTTTGAA GATAAATACT CCCTCTCCGA CTTGCGCACT
ACGCAGGACT GGCTCATTCG CAGGCAGTTG CTGGGCACGC CGGGCGTTGC GGACGTGTCT
ACGTTCGGAG GAGAGCTGAA ACAATACGAA GTCGCCGTGG AGCCGTCGGG CCTGAAAGCG
ATGGGGCTCA CCATCACCGA TGTACTCACG GCGCTCAGCC GCAATAACCA GAACACCGGC
GGCGCTTACA TTGAAAAGGG CCCGACGGTG CTGTACATCC GCAGCCTCGG ACTGGCGGGG
TCGATAGACG ACATCAACCA TATCGTGGTG GCCAACCGCG GCGGCGTGCC GGTGCTGGTG
CAGCATGTGG CGCAGGTACG GTTCGCGCCC GCGATCCGTT ACGGCGCGCT CACCATGGCC
GGGTATGGCG AGGTGGCCGG AGGCATTGTG ATGATGCTCA AAGGCGGTAA TTCGTCGGAC
GTGGTAGGCA ATGTAAAAGC CAAAATCGCG GAAATCAGCA AAACGCTTCC CGAAGGACTT
GAAATAGAGC CGTTCTTGGA TCGTACCAAA ATGGTGAACA ACGCCATCGG TACCGTGGAG
CGCAACCTGC TCGAAGGGGC GGTGATCGTC GTGATCGTGC TGGTGCTTTT TTTGGGAAAT
CTGCGGGCTG GTTTGATCGT CGCTTCGGTC ATACCGCTTT CCATGCTTTT CGCCGTGGCG
ATGATGAACC TTTTCGGCGT GAGCGGCAAC CTCATGAGCC TCGGCGCGCT CGATTTCGGG
CTGATCGTCG ACGGCGCGGT CATCATCGTG GAGGCCATAC TGCACCATTT ACACGCTCCT
GGCGGATATA GGGGCGCCAC ACGTCTCACT CAGCAGGAAA TGGACCGTGA AGTGTCGGGC
TCCGCCAGCC GGATGATGAA TGCCGCCGTA TTTGGTCAGA TCATCATCCT CATCGTATAC
CTACCCATTC TTTCGCTGTC GGGTATCGAA GGGAAAATGT TCAAGCCGAT GGCACAAACG
GTCGCTTTCG CGATTTTGGG TGCATTTGTA TTGTCCCTGA CCTACGTGCC GACGGTAAGC
GCGCTATTGA TCAGCAAGAA GATCAGCCAC GCACCCAACT GGTCGGATCG ACTGATGGCG
CGGATCGAGC GGGCCTATGG CCGCGCACTG GCTTGGACGC TGCGCTTCAA AGTTGCGCTT
GTCGCGGGCG CATTTGCATT GTTCGGCGTG GCGGTGCTGC TGTTCTCGAG AATGGGAGGA
GAGTTTATCC CGCAGCTGGA AGAAGGCGAT TTCGCCACGG AGACGCGCCT GCTCGTGGGC
ACGAACCTCA CCACCACCAT CAACGCCATT AACCGCATTT CCGACCGCCT GCAAAAGGAC
TATTCCGAAG TGGAGAAGAT CGTGTCGCGC ATCGGCTCCG CCGAAATCCC CACCGATCCG
ATGCCGATCG AAGGCGGGGA TATGATCATT GTTTTGAAAG ATAAGTCCGA ATGGACGCAT
GCTAAAAGCT TTCCCGAACT CGCTACCAAA ATGGCCGCAA CTGCCCAGGA AGTGGTGCCT
GGCGTAACCA CAGGCTTTCA GTATCCGGTT CAAATGCGTT TCAACGAGCT CATGACCGGC
GCCAAGCAGG ATGTGGTTTG CAAGATATTC GGGGAAGACC TGGACAAGCT CGCCGCCTAT
GCCAACCAGC TCGGGCACAT TGCCCGCGGC GTAAGCGGCA CCGCCGACTG GTATGTGGAA
GAGCTAGCGG GAATGCCGCA GATCGTGATC GATTTCAACC GCGCCGAAAT AGCCAAGTAC
GGGCTCAATG TCGATGATCT CAACAAAACC ATCAACGCCG CATTTGCAGG CGCGGCCGCG
GGGCAGGTCT ACGAAGGCGA AAAGCGCTTC GACCTCGTGG TGCGCGTAGG TGCGGAAGGG
CGCAAGCGCA TAGCCGACGT GCAGAACCTG CTCGTATCCA CGCCGGGCGG CGTACAAATC
CCGCTCAGCC AGGTGGCGGC CGTGCGTGAG ATCGAAGGGC CGAACCAGAT CCAGCGTGAA
AACACGCGCC GGCGCATTAT CGTCGGGTTC AATGTCCGGG GGCGTGATGT CCAATCCATC
GTCGAGGAAT TACAACGTAA AGTCGATGCC GGTATTAAAT TCGAAAGCGG ATACGCCATT
ACCTACGGCG GCGCGTTCGA AAACCTTCAA CAGGCCAAGG CACGCCTCGG AATTGCAGTG
CCGGTGGCTT TGCTGCTGAT TTTCATGATG TTGTACTTTA CATTCTCCTC GGTGAAGGAC
GGGGCGCTGA TTTACACGGC CATTCCGCTA TCGGCCATCG GCGGCGTATT TGCGCTGGCT
TTGCGTGATA TGCCGTTCAG CATTTCGGCG GGGGTGGGCT TCATCGCATT GTTTGGCGTG
GCGGTGCTGA ACGGCATCGT GCTCGTATCC GAATTCAACC GCATCCGCAA GGAAGGGACC
ATTACCGACA TGTTGCAACT TGTGATGACC GGCACGCGCA ACCGCCTGCG CCCCGTGCTG
ATGACCGCCG CCGTGGCGTC GCTCGGCTTC CTCCCGATGG CGATCAGCAA CGGCGCCGGT
GCCGAGGTGC AGCGCCCCCT CGCGACGGTG GTAATAGGCG GGCTGGTGAC GGCTACTTTG
CTCACATTGT TTGTATTACC GGCTTTGTAT TTGTTGTTTA ATCCTAAAAA CACCCTGCAT
GCAGGGCCGC GTGGTGCAAC CACTGTAATC GTTGTACTCT TATTGGTAAC GCAGGCTGCG
CGCGCCCAGC AGCCACGACA GGTAACGCTC GACGAAGCCA TACAAAAGGC ATTAGCCCAC
AACCGAACGC TCCAAAGCGG CCGACTGGGC GAGCAGGCCG CCGACAAGCT CCGGCGCAGC
GCATTTGACA TACCCAAAAC CGCGATCAGT GCCGACTACG GGAACTTCAA CAGTCCGAAC
AACGACACCC GCATCGGCAT TTCGCAGTCA ATCGCATTCC CGACGGTGTA TGCCAACCAG
CGGAAAGCCC GGGAAGCCGA TTACCTTGCG GCGCGCGCGC AAACCCGACT GGCCGAGCAG
GAAGTACGAA CGGGCGTGCG GCGGCTGTTC TTTGAATATG CGATATTGAA AGAGCGGGAA
AAGCTGCTGA CGCACGCCGA CAGCATTTTT ACCGGTTTTG AAAGCAAATC GAACCTCCGT
TTCGAGCGAG GTGCTTCCAA TGTGCTGGAA AAAACGGCTG CCAGTTCGCA AAAACAGCAG
ATCGCCAACC AGCTTAATCT CGTGCGGCAT GACCTGGACA TTCTGGTGGA ACGGTTCAAT
TTCTGGTTGC AGGATTCGCT GACGTATGTG CCTCAGAGGG TCAGCTCGCG CATGCCCGCG
TACGCATTGC CCGATACCAC CGCAGTCATC GCCGATTTAC CGCAGATCGA GCTGAACAGT
CGGCTTACGC AATCGGCGTA TTTCCGCTAC CGTACCGAAA AAGGCAGAAT GCTTCCTGAA
CTATCGGCAG CTTATAATAA TCAGAGCCTT CGCGGAACAC AGCTGCTGGA TGGCCGGGAG
ATCAATTTAA CAGGCAAAGA CAGGTTTGGC TATTTGGGTC TGGGGCTGAA TTTTCCGTTG
TTTTTCAAAG CCCAAACCGC GCAGATCGCT GCGGCGCGCC TCGATTGGCT TCGCGCCCGC
AACGAAGCGG AGCTTGCAGA GTACCGGTTG CGTTCGGATT GGAAAACGGC AAGCGGGGAG
GTCCGGAAGT TTACCGAAAA TCTCCGCTAC TACGAGCAAC AGGGCCTTCC AAACGCCGAG
ACGATCCTCG CAGCGGCCGA CCGGCAATTC GCGGCCGGTG AGATCGACTA CCTTCAATGG
GTAATCCTCG CGAGGCAGGC CATTGCCATT AAAAGTGAAT ATGTGAATGC ATTGGCCAGC
TACAATGAGG CCGTGATCCA ATTACTCCAT TTAACTAACC ACTGA
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| Protein sequence | MLNRIIRFSV ENKLVIGIFM VLWVAFGIYE LTRLPIDAVP DITNNQVQII TTAPSLGTED
VERLITFPIE QATANIPGLK ESRSMSRFGL SLVSIVFDDD SDIYWARQQV TERLSQVEMP
ETAGKPELAP VTTGLGEIYQ YVVKPKKGFE DKYSLSDLRT TQDWLIRRQL LGTPGVADVS
TFGGELKQYE VAVEPSGLKA MGLTITDVLT ALSRNNQNTG GAYIEKGPTV LYIRSLGLAG
SIDDINHIVV ANRGGVPVLV QHVAQVRFAP AIRYGALTMA GYGEVAGGIV MMLKGGNSSD
VVGNVKAKIA EISKTLPEGL EIEPFLDRTK MVNNAIGTVE RNLLEGAVIV VIVLVLFLGN
LRAGLIVASV IPLSMLFAVA MMNLFGVSGN LMSLGALDFG LIVDGAVIIV EAILHHLHAP
GGYRGATRLT QQEMDREVSG SASRMMNAAV FGQIIILIVY LPILSLSGIE GKMFKPMAQT
VAFAILGAFV LSLTYVPTVS ALLISKKISH APNWSDRLMA RIERAYGRAL AWTLRFKVAL
VAGAFALFGV AVLLFSRMGG EFIPQLEEGD FATETRLLVG TNLTTTINAI NRISDRLQKD
YSEVEKIVSR IGSAEIPTDP MPIEGGDMII VLKDKSEWTH AKSFPELATK MAATAQEVVP
GVTTGFQYPV QMRFNELMTG AKQDVVCKIF GEDLDKLAAY ANQLGHIARG VSGTADWYVE
ELAGMPQIVI DFNRAEIAKY GLNVDDLNKT INAAFAGAAA GQVYEGEKRF DLVVRVGAEG
RKRIADVQNL LVSTPGGVQI PLSQVAAVRE IEGPNQIQRE NTRRRIIVGF NVRGRDVQSI
VEELQRKVDA GIKFESGYAI TYGGAFENLQ QAKARLGIAV PVALLLIFMM LYFTFSSVKD
GALIYTAIPL SAIGGVFALA LRDMPFSISA GVGFIALFGV AVLNGIVLVS EFNRIRKEGT
ITDMLQLVMT GTRNRLRPVL MTAAVASLGF LPMAISNGAG AEVQRPLATV VIGGLVTATL
LTLFVLPALY LLFNPKNTLH AGPRGATTVI VVLLLVTQAA RAQQPRQVTL DEAIQKALAH
NRTLQSGRLG EQAADKLRRS AFDIPKTAIS ADYGNFNSPN NDTRIGISQS IAFPTVYANQ
RKAREADYLA ARAQTRLAEQ EVRTGVRRLF FEYAILKERE KLLTHADSIF TGFESKSNLR
FERGASNVLE KTAASSQKQQ IANQLNLVRH DLDILVERFN FWLQDSLTYV PQRVSSRMPA
YALPDTTAVI ADLPQIELNS RLTQSAYFRY RTEKGRMLPE LSAAYNNQSL RGTQLLDGRE
INLTGKDRFG YLGLGLNFPL FFKAQTAQIA AARLDWLRAR NEAELAEYRL RSDWKTASGE
VRKFTENLRY YEQQGLPNAE TILAAADRQF AAGEIDYLQW VILARQAIAI KSEYVNALAS
YNEAVIQLLH LTNH
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