| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0985 |
|---|
| Symbol | |
|---|
| ID | 8224555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1147181 |
|---|
| End bp | 1150339 |
|---|
| Gene Length | 3159 bp |
|---|
| Protein Length | 1052 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644928846 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003085399 |
|---|
| Protein GI | 255034778 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAT TAATTACTGC ATGTCTCGGA ATATGCGCGT TTCTCCTGCT ATGCGGGGCC
CAGGCGTGGG CGCAGGGGAA CGAAGCATCC ATTGTCGGGA AAGTCAGCGA AGGACAGGCC
GGGCCGGTGG TCGGTGCAAC GGTGTTTGTC AAAAACGAAT CGACCGGTTT CAGTACGGGT
ACGGTCACGG ACGCCAATGG CGACTACATT ATCAAGCAGT TACCGCTTGG TTCGCCCTAC
TCGATCAGCG TGTCGTTTAT CGGTTACGGT GAGCAGAAAA AAACGGGCTA TTCGCTCAAC
CAGGGTGATC AGCTGCGCCT AAATTTCTCG CTGGAAGCAT CCGCCAACGA GCTGCAAGCC
GTCGAGATCG TTGCCAATTC ACTCAAAAAC ACGGTGGTAA CCCTGGGCGC ATCCACGCCG
GTGACAGCCC GGGACATAGC ACGACTGCCG GTGAACGGCC GGAATTTCAC GTCGCTCATC
GACCTTTCGC CGCTGAGTAA CGGGACTAGC CTCGGCGGAC AGCTGGCGTC ATCGACCAAC
TTCACGGTGG ACGGGATGAC GTCGCGCGGG ACCATTGCTG GTGGCGGAAC TTCGGGTGCC
TATTCGGTTT CGATGGAAGC GATCCGTGAG TTTAAGGTCG TAACCAACGA ATACGACGTG
ACCATGGGCC GCGCCGGTGG CGGTACGATC AGCACCGTAA CCAAGTCGGG AACCAACAAG
CTTTCCGGTA GCGCATTCGC ATTCCTGCGC AACGACGCGC TCGCGAGCAA ATACGACCTC
CGTGGCAACA AGCGGACACA GGAATACTCC ACCTACCAGT ACGGATTCTC GCTCGGCGGG
CCGATTATCA AGGACAAGGC GCACTTTTTT GTTGCCTGGG ACCGGCAGAC CGACTCACGC
CCGCTCTTCA TTGCCAATAT TCTCAGCCCT GCCGACGAAG CTGCCAACCG CGTTACACAG
GCAACACTCG ACCGTTTCGC GGGCATTGCC CGTGACAAAT ACGGGGTGTC CAACAACCCG
CAGTTCGGCG CGTTCGATAA GGCGAAAGGG ACCAACGCGA TATTTGCCCG GATAGACTGG
CAGTTGAATG CTAAAAACCT CCTCACGATC CGCAATAACA TGGTGATCGA GAACGACAAC
CTTTCGGAAG GTGACAACTC GGGGATCAAC TTCTACGAGT CGTATATCGA CCGCAAGAAG
TTCGACAACA GTCTGATGGC GTCACTTAGA ACGACGTTGA ACCCGCGATT GACCAATGAA
CTGAAAGTGC AGCATTTCTA CGAAGATGTG CAGGTATTGC CCAGCTCCGA ACTGCCTTCG
GCAGGTATTC CGCGCGCGAT CGTCGAAAAC GTGGAATCCG TTGCCGGATC AGCCACTTAC
CTGAACTCGA TCCAGATCGG CGGCCAGCGC TTTTCTCCCG AATGGTTTAA GGGAACAGTA
ATACAGGCCG TAGATAATCT GTATTACAAC ACCGGGAAGA TCAATTTCAC GTTCGGGATC
GATATGATGT ACAACTCGAT GCACTCGCGC TATGGCAGCG AAATGAATGG CCGTTTCTAC
TTCACGGGAA TGGAGAATTT CAATAACCTG AAACCATACC GTTATGCCCG TGAAATTTAC
CTCACCGAGG ACCAGGGCAA TAAAGTGAAG TCGCTCAGCA CCGGGCTGTA TGCGCAAATG
GACACCAAAC TGGGTGTGGG CCTTGATATG ACGGCCGGGT TGCGCCTGGA TAACACCGTG
TACCTGAACC GCGCGAATTT CAGCCAGGTG GTATTTGATG AACTGGGCAT TAAAACGAAC
AACCGGATCA ACACGCTCCA ATTGCAGCCG CGCGTACAGT TTACCTGGGA CGTAAACGAG
CAGAGCAAGG ATGTGATCCG CTTCGGTGCA GGGATTTTCG GATCAGCCCT GAACCCTTAC
TCGATGATCA ACAACATGCT GTTCGATGGT TCCAAAGTGG CTTCGGTGGA GATCCAGGGT
GACCTTGTCC CTTCTCCCAA TTTCCCATTG TACCGCCAGG ACCCAAGCAA GGCCCCGGGT
GCGGAGTTGT TCAATATTCC GGGCATCGAG CGCCTCGTGA CGATCAACAC CAACAGCCCT
GACGCGAAAG TTCCGGTTTT GTATAAAGCC AATTTGTCCT ACAATCACTT TTTCAGCGAC
CGTCTGCGGA TCGGTGTGAC CGGATATGCT TCCTGGGCAC GCAACAACTA CTTTTACGCG
GACCGCAACA TGGTGGATGA GCCGTTCTTC CGCATTGCCG CAGAAGCGAA CCGCGGCGTG
TATGTGCCCG CAGAAAGCAT CAATGCCGCC AACGGAGCCA CCAACTGGCT GCGCGGCCGT
AAAACGACCA ACGTGGGCCG CGTGCTCGAA CTCGTGAGCG ATGGTAAGAA AAACCAGTAT
GCGCTCGTGA TCGACGGTAC GTACAAGTAC TTCCGCGACG GCCAGATCAC CGCTTCCTAC
ACCTGGAACG ACTCGAAGGA CAACACTTCC TACAATGGTA ACGTAGCCAA CACGGCCACC
CTCGACCAGA TGGTGATCGA CGACCCGCGC GACCTGAGCC GCATGAGCTA TGCCAACAAC
CAGTTCCGCA ACAAGATCGT GGTATATGGT ACGGCGCCAA GCTTCTGGGG CATTACCCTC
GGCGTTCGCT ACTCAGGCAT CGGCGGAACG CGCTACTCGC TGGCCGTGAG CGGTAATATG
AACGGCGACT TCGTGTCTTC CAACGACCTG CCCTACATTT ACGACCACAA CAGCTCTGCC
ACACCCGAGT ACATCCGCAC GGGCATCAAA GCCATCCTGG ACAATCCTGA GGCAGAGGAG
AGCATCAAAA CATTCATACG CGAAAACACC GGCAAAATGG CCGAGCGTAA CGGAGGTGTC
AACGGGTTTT ATGGTGTGTT CGATGTGCGT TTGGGCAAGA AGTTCAAGAT CCACAAATCG
CACGGCATTG AGGCTTCGGT GGACGTGTTC AACTTTGCCA ACCTGCTCAA CAAGGAATGG
GGCGTGGGTA ACAACCTCGG CAAGCAGAAC CTGTATACCA TCAAGAGCTT CGACAAAGCC
AAAAACGAGT TTGTCTACAA TGTCAACAAA GGTGCAGGCG TATCAAGCCT GAACGGAAGC
CCCTACCAGA TCCAGCTCGG CCTGCGCTAT TCGTTCTGA
|
|---|
| Protein sequence | MRKLITACLG ICAFLLLCGA QAWAQGNEAS IVGKVSEGQA GPVVGATVFV KNESTGFSTG
TVTDANGDYI IKQLPLGSPY SISVSFIGYG EQKKTGYSLN QGDQLRLNFS LEASANELQA
VEIVANSLKN TVVTLGASTP VTARDIARLP VNGRNFTSLI DLSPLSNGTS LGGQLASSTN
FTVDGMTSRG TIAGGGTSGA YSVSMEAIRE FKVVTNEYDV TMGRAGGGTI STVTKSGTNK
LSGSAFAFLR NDALASKYDL RGNKRTQEYS TYQYGFSLGG PIIKDKAHFF VAWDRQTDSR
PLFIANILSP ADEAANRVTQ ATLDRFAGIA RDKYGVSNNP QFGAFDKAKG TNAIFARIDW
QLNAKNLLTI RNNMVIENDN LSEGDNSGIN FYESYIDRKK FDNSLMASLR TTLNPRLTNE
LKVQHFYEDV QVLPSSELPS AGIPRAIVEN VESVAGSATY LNSIQIGGQR FSPEWFKGTV
IQAVDNLYYN TGKINFTFGI DMMYNSMHSR YGSEMNGRFY FTGMENFNNL KPYRYAREIY
LTEDQGNKVK SLSTGLYAQM DTKLGVGLDM TAGLRLDNTV YLNRANFSQV VFDELGIKTN
NRINTLQLQP RVQFTWDVNE QSKDVIRFGA GIFGSALNPY SMINNMLFDG SKVASVEIQG
DLVPSPNFPL YRQDPSKAPG AELFNIPGIE RLVTINTNSP DAKVPVLYKA NLSYNHFFSD
RLRIGVTGYA SWARNNYFYA DRNMVDEPFF RIAAEANRGV YVPAESINAA NGATNWLRGR
KTTNVGRVLE LVSDGKKNQY ALVIDGTYKY FRDGQITASY TWNDSKDNTS YNGNVANTAT
LDQMVIDDPR DLSRMSYANN QFRNKIVVYG TAPSFWGITL GVRYSGIGGT RYSLAVSGNM
NGDFVSSNDL PYIYDHNSSA TPEYIRTGIK AILDNPEAEE SIKTFIRENT GKMAERNGGV
NGFYGVFDVR LGKKFKIHKS HGIEASVDVF NFANLLNKEW GVGNNLGKQN LYTIKSFDKA
KNEFVYNVNK GAGVSSLNGS PYQIQLGLRY SF
|
|---|
| |