Gene Dfer_0965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0965 
Symbol 
ID8224534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1121635 
End bp1122867 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content45% 
IMG OID644928826 
Producthypothetical protein 
Protein accessionYP_003085380 
Protein GI255034759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.198201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000190957 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTAAACG TCCTTACCTC ACTTTTGCTA ATTATATCGC TGGCGATGCC ATTGTGCGCC 
CAGGATACTA CATCAATTAT ATTTTCCGAG GAAGCAGTAA CGCTTGAAGA CCAGCACTTT
GTCGACCGGT ATGAAAATGT CTTCATGACC AAAATTCCTA CAAAAAGGAT TTTTAAGCTG
GGTTACACAG CATCCACTTA CAAGGGGATG GGACTTACTG CCGCAGTTGA ATACAAGCTT
TTCCCCTTTT TATCCTTGGA GGCTGCCATT TATTCAAGGG CAGCCCGCGA GGGCGATGGA
ATTTATCTAG ATAGTTTTTT CAGGCAGTTG AGCGGCCGAA ATTTATTTGC TAGCGTCGGT
AGCCGCTGGT ATCCCAACAT GATGCGTAGG ATCGCCCGTC AGCAAAGCGC CAATAATTTT
ACAGGGAGTT ATTTGTCTGT TTTATATGAA AGATCAGTGG GTGCTATTCA ATATGGGTAT
GTAAGGGACC ATTTTAGTCT GTCTTACGGT TTCCAAAGCC GTTTTTTAAC AAGCGGCTTT
CTTGATTTTT CCCTGGGTCT GTACTACCTG AGACCATATC CTGAGTGGTA TATCTCGGGT
TGGCCGGTGA CGTCAAAATT TCGTATTAAC AATCTGGTTT TTGCGTCTCG TTCCTTGATC
GGCCTTGCTT TGGGAGATTG GAAAAGAACT GGTAGTGGCC CCTTATGTGA TGTGCTTCAT
TGCGACTATT TGGTCAGACA ACACTTCAAA ATTAGGTTGC CTGAGGTGAA CGTTGGTCTC
CAAAATCAAT CGATCCGGGC TGAAATCGGA TACGAGAGAA AAATCGGACG AAGCCCTTTC
TCGATGAATT TTACTGTCCG GAATGAAACT GATCGGTCAA CATTATACGG CTACAAAACT
TTTCACGGAA GGACAGAAGG CGAAGGACAA CTCCGATTCT ACTACCTTCA AAAAAATCAG
GTTAGAAAAG GGAAAGCATC AGACAACCTT TCGGGGTTGT ATGTGGGTGC TCGTTTTGGA
TATCGATGGG AATATGAGCA CTATAGTCAC CGAGAAAGGT ATTCAGGCCG CACCCAATTG
GTTGGAATAT CGGCAGGATA TCAACAACGC CTGTTTCACA AATTGTACTT CGATTCGGCA
GTCAGCCTCT CCGGTGTGGG CTATGTCAAA AGTATAGTGA AGGTTAAATC CGGCGAGGTT
AATGCCCGAG CAGGAGTTGG CTTTGCTTTT TGA
 
Protein sequence
MLNVLTSLLL IISLAMPLCA QDTTSIIFSE EAVTLEDQHF VDRYENVFMT KIPTKRIFKL 
GYTASTYKGM GLTAAVEYKL FPFLSLEAAI YSRAAREGDG IYLDSFFRQL SGRNLFASVG
SRWYPNMMRR IARQQSANNF TGSYLSVLYE RSVGAIQYGY VRDHFSLSYG FQSRFLTSGF
LDFSLGLYYL RPYPEWYISG WPVTSKFRIN NLVFASRSLI GLALGDWKRT GSGPLCDVLH
CDYLVRQHFK IRLPEVNVGL QNQSIRAEIG YERKIGRSPF SMNFTVRNET DRSTLYGYKT
FHGRTEGEGQ LRFYYLQKNQ VRKGKASDNL SGLYVGARFG YRWEYEHYSH RERYSGRTQL
VGISAGYQQR LFHKLYFDSA VSLSGVGYVK SIVKVKSGEV NARAGVGFAF