Gene Dfer_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0943 
Symbol 
ID8224512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1097653 
End bp1098966 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content46% 
IMG OID644928806 
Producthypothetical protein 
Protein accessionYP_003085360 
Protein GI255034739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0646583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA AACCATACAC CCGTAAATTC TTACAAAAGC GTAAGTTTTA TACAGTCCTG 
CCACTGCTGG TTTTTCCATT TCTCACACTA ATAGCCTGGG CATTATTCGG AAAGGGCGAC
GGAGGATTAG TTTTATCAAA AGAGAGAAAG GGGCTAATTA TGAGCCTTCC AGATGCCTTT
TTGAAAGATG AGAAAGACCT GAATAAAATG GGCTACTACC AAAAAGCGGC CGAAGATTCT
GCAAGGCTCC GTAATCTGAT CGAGAAAGAC CCGTACTATC AGGACACGCT ACTCGCCTCG
AAATCCGGCC CTTTGGGTGT GCCGCTCAAA AGTCTGGAAG GGCCGGGAAA AACAAAGAAA
GGAACCGCTG ACCAAACTTC TGTAAATGCC GATCAGGCTG ACAAAGAAGT GTTCCAAAAA
CTCCAAGAAC TAGACAACGT CTTATCAAAA ACCAGCAATC CAAATTTTGA CGATCCCAGT
AAGCCCAAAG CTGCGGCCCA AAAGGAGGAT GTAAATCACG AGCGACTTGC GCAGTTAGAA
CAAATGATGG CTGGCCTTGG GGAGGGAGAC GAGTCAATCA CTGAGGCCGA TCCTGAGATG
GCCGAGCTAA ATGGAATGCT CGACAAGATT ATGCAAATTC AAAACCCTGA GCTACAACTT
GAACAGACTC GAAAGCAATC GCTACAAAAT AGAAAGCAGG TCTTTCCGGT AGCAGCGGTT
ACTGATCAGG TACAATTTAC TCTCCTTGGT GGTCAGGGCG AACTTTCGGA CAGTTTAAAA
CATGGCACGT CAACTCAGCA AAAAGGTTTC CATTCCTTAG AAAATCAGAG GAGTGCCACG
CAAACGCAAA ACGCGATCGA AGCGATTATT GATCAAAATC AAACACTCGT GACGGGCGCT
ACAATTAAAT TTCGGTTGAC CACGGACATC TTTATAGCGG GCACTCGTAT CCCGGCCGGT
AGTTTTCTGT ACGGAAAGAG CAGTCTTAAT CAGGAAAGGC TTCGCGTGAA TATTGAGTCT
GTCAAGTCTG GTAATTCTTT GTTTCCCGTC AGCTTGTCCG TTTATGACAT GGATGGAATG
GAAGGAATTT ACGTTCCCGG CGCACTTTCT CGCGATGTTG GTAAAGAATC CTCTGACCGC
GCGATTCAAG GGATTAACAT TCCAATCATC GACCCTTCTC TCGGCGCACA AGCTGCAAGT
GCAGGAATCG AAGCTGCGAA GACATTTCTC GGCCGAAAAA CAAAACTGAT CCAGGTATCT
GTGAAGGCTG GCTATAAGGT GCTTCTCAAA GACGCCAACG CCAAATCAAT CTAA
 
Protein sequence
MQTKPYTRKF LQKRKFYTVL PLLVFPFLTL IAWALFGKGD GGLVLSKERK GLIMSLPDAF 
LKDEKDLNKM GYYQKAAEDS ARLRNLIEKD PYYQDTLLAS KSGPLGVPLK SLEGPGKTKK
GTADQTSVNA DQADKEVFQK LQELDNVLSK TSNPNFDDPS KPKAAAQKED VNHERLAQLE
QMMAGLGEGD ESITEADPEM AELNGMLDKI MQIQNPELQL EQTRKQSLQN RKQVFPVAAV
TDQVQFTLLG GQGELSDSLK HGTSTQQKGF HSLENQRSAT QTQNAIEAII DQNQTLVTGA
TIKFRLTTDI FIAGTRIPAG SFLYGKSSLN QERLRVNIES VKSGNSLFPV SLSVYDMDGM
EGIYVPGALS RDVGKESSDR AIQGINIPII DPSLGAQAAS AGIEAAKTFL GRKTKLIQVS
VKAGYKVLLK DANAKSI