| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0923 |
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| Symbol | |
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| ID | 8224492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1078720 |
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| End bp | 1079745 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644928787 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003085341 |
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| Protein GI | 255034720 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.406343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0918592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA GCAATTTTCA GGGCGCATTG CAGCAGCCCA TTGGCTCAGG GTTTGACAAA
AACTCAACGG CGGCAGACGT AATCAAAGGA ATAGACCTCA CCGGAAAAAT AGCCATTGTG
ACAGGCGGGC ATTCCGGTCT TGGTCTGGAA ATCACTAAAA CACTCGCCAG CGCAGGTGCC
AGGGTGATCG TGGCAGCCCG TGACTTTTCA AAAGCCGAAA AGAACCTCTC GCAAATCTCC
AACGTGGAAC TCGCCGAATT AGAGCTCACC GATGCCGGAT CTGTTGAAAG TTTTGCAGGA
TCTTTTCTGG CGTCAGAGCG GCCACTGCAT TTGTTGTTCA ATAATGCAGG CATCATGTGG
GTTCCACTGC AACGTGATGC GAATGGCTAC GAAAGCCATT TTGCAACCAA CCACCTGGGG
CACTTCCATT TAACAGCCAG GCTTTGGCCA GCTTTGAAAA AAGCGAACGG CGCGAGGGTC
ATCAACACTT CTTCCTGGGG GCACCATGCA TCTCCCATTG TTTTCGAAGA TCCGAATTTT
CAAAGCCGGG AATATGATCC GATGCAGGCA TATGGTCAGT CCAAAACAGC GAATGTCTTG
TTTGCATTGG AGCTTGATGA GCGTGGAAAG CGATTTGGTG TGCGTTCCTA TTCTGCGCAT
CCCGGCCTGA TCCTCACCAC CGATCTAGGG CGTTCGATTA CGCCGGACAC GATGAAAAAG
TTGGGCATGC TTAATGCCGA CGGCAACCCA GTACATCGTG AATACACCGG CACTAAAACT
GCCCAGCAGG GAGTGTCGAC ATTGATCTGG TGCGCCACAA GTCCTCAGCT CATAGATATC
GGCGGCGTCT ATTGTGAAAA CACGGACATT GCTGTGTTAG ACACAGACTA CGATCCTAAG
GAAAACTGGG CCTATGACAC GTCTAAGATC AAAGGAGTTA TGCCTTTCGC CCTCGATGCT
GATGCTGCCA GGCAGCTTTG GTCATTGAGT GAGGAACTAA CTCAGGTCAA ATTTGACGTT
ATATGA
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| Protein sequence | MKQSNFQGAL QQPIGSGFDK NSTAADVIKG IDLTGKIAIV TGGHSGLGLE ITKTLASAGA
RVIVAARDFS KAEKNLSQIS NVELAELELT DAGSVESFAG SFLASERPLH LLFNNAGIMW
VPLQRDANGY ESHFATNHLG HFHLTARLWP ALKKANGARV INTSSWGHHA SPIVFEDPNF
QSREYDPMQA YGQSKTANVL FALELDERGK RFGVRSYSAH PGLILTTDLG RSITPDTMKK
LGMLNADGNP VHREYTGTKT AQQGVSTLIW CATSPQLIDI GGVYCENTDI AVLDTDYDPK
ENWAYDTSKI KGVMPFALDA DAARQLWSLS EELTQVKFDV I
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