Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0902 |
Symbol | |
ID | 8224471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1061348 |
End bp | 1062259 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644928766 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003085320 |
Protein GI | 255034699 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0811669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGACAT CAAATGATAT ACCTGATTTA ACAGGTAAAA TAGCAATAGT TACGGGGGCT AACACCGGGA TCGGATATGA GGTAGCCAAG GCCCTGCACG ACAAGGGAGC GAGTGTGACG GTAGCCGCCA GGGACATTGA AAAATCTGTG TCGGCAATAG AAAGGATTAC GACTGAAACC GGAAAGGCGG GCGGCCTGGA AATTGGCTTA CTGAACCTCG CAAGCCTTGA CGAAGTCAAA CGCTTTGCCG ACAATTTCAG CGAAACTCAC CGTCATTTAG ACATTCTTGT CAACAATGCA GGTGTGATGA TCCCACCGGC ATCCAAAACA GACCAGGGCT TTGAATTGCA GTTCGGTGTC AATTTCCTGG GGCATTTTGC CCTCACGGCA CATTTGTTCC CCCTATTGCA GGCGGCTGGA AACGCCCGGG TGGTAATACT GTCCAGCGGT GCTGCAACGC TGGCCTCCGG AGTTGATTTC GGCAATTTGA AGATCGAAAA GTCCTACGAC CCCTGGCGCG AATACGCGAT CAGCAAATTG GCCGATATCC TGTTTACCTA TGAAATGGAC CGCAGGATGA AAGCCAGCAA CAGTCCTATC CTGTCTGTGG CTGCACACCC CGGCGTTACC CGCACAGACC TGCAAAGGCA TATCGACAGC GAAGTGCTTC CCGGCATGTT CGCACAATAC GAAGTAGTGA TGGAACCATG GCAGGGTGCG CTGCCAAGCC TGTTTGCGGC CACCGACAGC TCCATTCGGG GCGGCGAATT CATCGGCCCC GACGGCCCCA ACGAGTATGC CGGCTATCCC GCTTTGTCAA AGCATTCCAC GCCGGCCATG AACGATCAGG ACCTGGCACG GCAGCTTTGG GATTATGCAG AAATGGTAAC GGGTACAAAG TTTATTTTTT AA
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Protein sequence | MWTSNDIPDL TGKIAIVTGA NTGIGYEVAK ALHDKGASVT VAARDIEKSV SAIERITTET GKAGGLEIGL LNLASLDEVK RFADNFSETH RHLDILVNNA GVMIPPASKT DQGFELQFGV NFLGHFALTA HLFPLLQAAG NARVVILSSG AATLASGVDF GNLKIEKSYD PWREYAISKL ADILFTYEMD RRMKASNSPI LSVAAHPGVT RTDLQRHIDS EVLPGMFAQY EVVMEPWQGA LPSLFAATDS SIRGGEFIGP DGPNEYAGYP ALSKHSTPAM NDQDLARQLW DYAEMVTGTK FIF
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