Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0899 |
Symbol | |
ID | 8224468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1058071 |
End bp | 1059546 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644928763 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003085317 |
Protein GI | 255034696 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0517319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATTT GCTTTTGCGA TGCTACCGGG ACAATCACTT ACGGCAATGC CATGTCGCAA GTGCTTTGGG GCGCAGAGGG CATTCCGTCA CAGAAATTCT GTGGTTCTCA CCGTCTTTTA AATGCCGACG GCTCATTGTT GCTTTTTGAA GATTCGCCCG TTGCTATCTG CCTTAGAGAA AACCGTCCGG TTGCGGGTTT TGACCTTACT ATGGAGCGGC GCGACGGTTC GGTGACCAAT GTCAGCTCCA ATGTGTCCCC AGTTTATAAC AATGCCGGTG ATCTGCTCGG GGCAGTTAAT TGTTTCCACG AAAACACGAG CCAAAATGCG GCCCAGCAAG CGCTTAGCAG AAAAACTTTT GAGTTGCAGG AGTACATCGA CAATGCTTCT ATAGGTCTGC ATTGGGTCGA CCATCAGGGC ATTATCAAAT GGGCAAACCA GGCGGAGCTT GACATGCTGG GCTACACGCG TGAAGAATAT GTAGGGCATC ATATTTCAAC TTTCCATCTG CACCTTGACA AAATCAATGA TATTCTCAGG CGCTTGCAAG AGGACGAGGT CCTGAATCAA TACGAATCGG AAATGGTCTG TAAAGACGGA AGCATCCGTG TTGTACACAT CAGTTCGAGT GTTTTTCGTC AGGACGGCCA GTTTGTTCAC ACCCGATGTT TCACCGTTGA TGTAACAACC GTCAAACAGG CCGAATTGCA ACTCATGGCC GACCAGCTAC AAATTATGAA TAAAAAGCTC GAAAAGTCGA ACAAGGAGTT GCAGGATTTT GCCTATGTGG CCAGCCATGA TTTGCAGGAA CCTTTACGTA AAATAACCGC GCTCGGCACA TTGCTTGTTA ACAGGCATTC TCATGCGCTT AGCCCGGATG GAACAAACCT GGTGATCAGA ATGCAGGCCG CATCCAATCG CATGAATATT TTGATCGAGG ACTTGCTGCA CTTGTCGCAA GTGTCCAGTG TGAAAGAGAA GACGCGCGTT AATCTGCACG AAGAAATCAA TGGGGTTTTG ATGGATCTGG AATCGGCGAT CACGGCAAAA GGTGCCGAGA TACATCTGGA AGATCTTTAT CCAATGAATG GATATGCTCC GCAAATCAGG CAGCTATTTC AGAATTTAAT CGGGAATGCA TTAAAATTCA GCCGTCCAGG AGCAGCGGTA GTTGTTCGTA TATCCTCGCA GCTTGTAAGG GGCGCTGATA GTGGTTTCCG TTTGTTTGGG CTGGAAGCCG AAAAACAGTT CCAGCTGATT GAAATCAAAG ACAACGGTAT AGGTTTCGAA CCAAAATATG CACAAGATAT CTTCGAGGTA TTTCGGCGTT TGAACGGCAA ACACGAATTC GCTGGAACTG GGATCGGCTT ATCTATTGTG AAGAAAGTTA TCGAAAATCA CCAAGGCCAT ATCCTTGCAG AGGGGCGCAA AGGGGATGGC GCGACATTTC GGATATTGCT GCCAACGTTG GAATAA
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Protein sequence | MGICFCDATG TITYGNAMSQ VLWGAEGIPS QKFCGSHRLL NADGSLLLFE DSPVAICLRE NRPVAGFDLT MERRDGSVTN VSSNVSPVYN NAGDLLGAVN CFHENTSQNA AQQALSRKTF ELQEYIDNAS IGLHWVDHQG IIKWANQAEL DMLGYTREEY VGHHISTFHL HLDKINDILR RLQEDEVLNQ YESEMVCKDG SIRVVHISSS VFRQDGQFVH TRCFTVDVTT VKQAELQLMA DQLQIMNKKL EKSNKELQDF AYVASHDLQE PLRKITALGT LLVNRHSHAL SPDGTNLVIR MQAASNRMNI LIEDLLHLSQ VSSVKEKTRV NLHEEINGVL MDLESAITAK GAEIHLEDLY PMNGYAPQIR QLFQNLIGNA LKFSRPGAAV VVRISSQLVR GADSGFRLFG LEAEKQFQLI EIKDNGIGFE PKYAQDIFEV FRRLNGKHEF AGTGIGLSIV KKVIENHQGH ILAEGRKGDG ATFRILLPTL E
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