| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0893 |
|---|
| Symbol | |
|---|
| ID | 8224462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1053704 |
|---|
| End bp | 1054597 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644928758 |
|---|
| Product | protein of unknown function UPF0187 |
|---|
| Protein accession | YP_003085312 |
|---|
| Protein GI | 255034691 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.193687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTCG AGAATAAACT ACCACTGCGA TACTTGATCG GCATTGTAAA ATATGAGCTT
ACCGCCGTCC TGATATTGAG TCTGATCACC CATTTCGGCG CCTTCCGGCT TACCGACTTC
CTGCCCGACA TGCCGCTGGC CATTCCGGCT TTTCTGGGGA CGTCCATTTC GGTTCTCTTG
TCATTTAAAA TGAACCAATC GTACGACAGG TGGTGGGAAG CTAGAAAAAT CTGGGGTGCT
ATTACCAACG ATTCGCGAAG CCTGATCATG CAGCTGCTGG CTTTTGTGAC GCACGATCAT
GATGGAATCG TAAAACGGAT CGCCTACCGG CAGGCAGCAT GGGGATATAC GCTTGGGCGC
TCCCTGCGAG GAAATGACCC ACTCGCTAAC CTGCAACACC TCATCGACGC TGATGATCAA
CACAAGATCC TGGCACACAC CAACAAACCT TTGGCAATAT TGCAGCTTAC GGTGCAGGAC
ATCAGTGCAA TGCGCGCAAT GGATGCATTG GACGTGCATG CACATATTCA CCTTCAGGAG
ACAGTCATCC GGCTGACGGA TTCCATGGGC GGCGCAGAGC GCATCAACCG GACCGTATTT
CCCTCGACAT ACCGGCTAAT CCTGCACTTG ATCATTTACC TGTTTGTGAT CACACTCACA
ATTTCGCTTA ATAGCATTAA CAATTTGCTC GTCATTCCGC TGCTGATGCT GATTTCCGCC
AGCTTTTTCT GCATCGAAAA GATCGCGTAC CATTTACAAG ACCCATTTAA AAATAGCCCA
AGTGATATCC CCATCACGGA AATCGCCAAA AATATAGAAG TCAACACGCG GCAATTGCTG
GGTGAAGAAG TGAAGGCGAC AGAGTCGAAT ACGGAAAGCT ATTTTGTTAT GTAA
|
|---|
| Protein sequence | MILENKLPLR YLIGIVKYEL TAVLILSLIT HFGAFRLTDF LPDMPLAIPA FLGTSISVLL
SFKMNQSYDR WWEARKIWGA ITNDSRSLIM QLLAFVTHDH DGIVKRIAYR QAAWGYTLGR
SLRGNDPLAN LQHLIDADDQ HKILAHTNKP LAILQLTVQD ISAMRAMDAL DVHAHIHLQE
TVIRLTDSMG GAERINRTVF PSTYRLILHL IIYLFVITLT ISLNSINNLL VIPLLMLISA
SFFCIEKIAY HLQDPFKNSP SDIPITEIAK NIEVNTRQLL GEEVKATESN TESYFVM
|
|---|
| |