Gene Dfer_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0887 
Symbol 
ID8224456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1046686 
End bp1047963 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content48% 
IMG OID644928752 
Producthypothetical protein 
Protein accessionYP_003085306 
Protein GI255034685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000458377 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.320696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT TAACTCGATC CAGGATAATG CTGCTTACAG CACTTACGGC TCTGTTCACG 
AGTCGTTCAC TTTCCTACGG CCAGCAAACG CGGGGCGTCG ATTGGATACA CGGTCTCGGT
GGGGATGTGA ACTCGTTGCG CAGAGTGGAC AGCTTATATA ATGCATTGCG ACGAGTAGTT
ACCCCAATCC GTCAGGGATA CAATACGAGT AACGGGATTA CTAACATGGC AACTGCAGTT
CAAGGAAGCA CAGGAGGAGC TAACAGGCTT GGCATAGGCC ATAGTCTCGG AGGAACCGCC
GCGAGACAAG TCAGTTTCTG GAACAATTCG CACTGGAGAG GTATAGTAAC CATGGGATCG
CCTTTGCGAG GTGCAAAAAT ATCTGCATCG GCTTCGGATG GAACAAACAC TGCATTCATC
AACAATGGTA TCGACCGGAT GATGGCCGGA CCGGGAGTTG GAGCAGGAAC AGCACCTCCA
ATCTTTCCGA ACCTAGGAAT ACTAATCCAC CAAGTGAGTA TTCTCGGCCA GCTTTTTTCC
GGCACGCTTG CTTCCAAAGC GAATAGTACG TTGATGAATA GCTTCGGCCT CGTCGGACAA
ACCGCGGTGG ATTTGCACCC CAATAGTAAC TATCAATCCG GCGCGCAATT CCAGGGTGCT
ACCGTACCGA AAATACTAAT TTGGGGAAAT GAAGTTTATC CGCTTTTATG GCGAACCGTC
GGAACATACT CATCCGATAA TGGAACCGAT GATCAGGGAG TAAGTATTGC ATCTACTGCC
GCTGACATTT ATAATACAAT CGCCAATGGT GAGGAAGCAT TGAGTTGGGC AAACCTGCCC
ATGCATGGGT TCCATCAATG GCGTAAGGGC AAATGGGAAG AAGGTAAAAA CTGGGTTAAC
AATGACTCAA ACGCTGGATG GGAGGAAGTG ATTGGTTCTA ATTACACAGA ATTGGTCTCA
TGGTATGAAA CTGTTGTAAC GTGCGATGCA AACCAATGGC AAGCGTGCTA TGCATCAAGT
CCCCCACCCG GTTATTGTGA TGACTATTGT ACAGATCAGG TATATCATTC TTATACCGTG
TACCATGACT ACCCGAGTGA TGGAGTAGTA ACTCAACGAT CAGCGACGAA TGATGGCGGA
AGCTGGCAAG GAATCCACCT TGAAGCTCCG AACACCAATC ACGGAGAATT TAAGCGACCG
GATAGGGTAA GACCGACGTT GGATTGGGTT TTCAATAACG GTGACCAAAG TGGGCACTTC
CAAATTGACC TCAGATAA
 
Protein sequence
MKILTRSRIM LLTALTALFT SRSLSYGQQT RGVDWIHGLG GDVNSLRRVD SLYNALRRVV 
TPIRQGYNTS NGITNMATAV QGSTGGANRL GIGHSLGGTA ARQVSFWNNS HWRGIVTMGS
PLRGAKISAS ASDGTNTAFI NNGIDRMMAG PGVGAGTAPP IFPNLGILIH QVSILGQLFS
GTLASKANST LMNSFGLVGQ TAVDLHPNSN YQSGAQFQGA TVPKILIWGN EVYPLLWRTV
GTYSSDNGTD DQGVSIASTA ADIYNTIANG EEALSWANLP MHGFHQWRKG KWEEGKNWVN
NDSNAGWEEV IGSNYTELVS WYETVVTCDA NQWQACYASS PPPGYCDDYC TDQVYHSYTV
YHDYPSDGVV TQRSATNDGG SWQGIHLEAP NTNHGEFKRP DRVRPTLDWV FNNGDQSGHF
QIDLR