Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0887 |
Symbol | |
ID | 8224456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1046686 |
End bp | 1047963 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644928752 |
Product | hypothetical protein |
Protein accession | YP_003085306 |
Protein GI | 255034685 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000458377 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.320696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCT TAACTCGATC CAGGATAATG CTGCTTACAG CACTTACGGC TCTGTTCACG AGTCGTTCAC TTTCCTACGG CCAGCAAACG CGGGGCGTCG ATTGGATACA CGGTCTCGGT GGGGATGTGA ACTCGTTGCG CAGAGTGGAC AGCTTATATA ATGCATTGCG ACGAGTAGTT ACCCCAATCC GTCAGGGATA CAATACGAGT AACGGGATTA CTAACATGGC AACTGCAGTT CAAGGAAGCA CAGGAGGAGC TAACAGGCTT GGCATAGGCC ATAGTCTCGG AGGAACCGCC GCGAGACAAG TCAGTTTCTG GAACAATTCG CACTGGAGAG GTATAGTAAC CATGGGATCG CCTTTGCGAG GTGCAAAAAT ATCTGCATCG GCTTCGGATG GAACAAACAC TGCATTCATC AACAATGGTA TCGACCGGAT GATGGCCGGA CCGGGAGTTG GAGCAGGAAC AGCACCTCCA ATCTTTCCGA ACCTAGGAAT ACTAATCCAC CAAGTGAGTA TTCTCGGCCA GCTTTTTTCC GGCACGCTTG CTTCCAAAGC GAATAGTACG TTGATGAATA GCTTCGGCCT CGTCGGACAA ACCGCGGTGG ATTTGCACCC CAATAGTAAC TATCAATCCG GCGCGCAATT CCAGGGTGCT ACCGTACCGA AAATACTAAT TTGGGGAAAT GAAGTTTATC CGCTTTTATG GCGAACCGTC GGAACATACT CATCCGATAA TGGAACCGAT GATCAGGGAG TAAGTATTGC ATCTACTGCC GCTGACATTT ATAATACAAT CGCCAATGGT GAGGAAGCAT TGAGTTGGGC AAACCTGCCC ATGCATGGGT TCCATCAATG GCGTAAGGGC AAATGGGAAG AAGGTAAAAA CTGGGTTAAC AATGACTCAA ACGCTGGATG GGAGGAAGTG ATTGGTTCTA ATTACACAGA ATTGGTCTCA TGGTATGAAA CTGTTGTAAC GTGCGATGCA AACCAATGGC AAGCGTGCTA TGCATCAAGT CCCCCACCCG GTTATTGTGA TGACTATTGT ACAGATCAGG TATATCATTC TTATACCGTG TACCATGACT ACCCGAGTGA TGGAGTAGTA ACTCAACGAT CAGCGACGAA TGATGGCGGA AGCTGGCAAG GAATCCACCT TGAAGCTCCG AACACCAATC ACGGAGAATT TAAGCGACCG GATAGGGTAA GACCGACGTT GGATTGGGTT TTCAATAACG GTGACCAAAG TGGGCACTTC CAAATTGACC TCAGATAA
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Protein sequence | MKILTRSRIM LLTALTALFT SRSLSYGQQT RGVDWIHGLG GDVNSLRRVD SLYNALRRVV TPIRQGYNTS NGITNMATAV QGSTGGANRL GIGHSLGGTA ARQVSFWNNS HWRGIVTMGS PLRGAKISAS ASDGTNTAFI NNGIDRMMAG PGVGAGTAPP IFPNLGILIH QVSILGQLFS GTLASKANST LMNSFGLVGQ TAVDLHPNSN YQSGAQFQGA TVPKILIWGN EVYPLLWRTV GTYSSDNGTD DQGVSIASTA ADIYNTIANG EEALSWANLP MHGFHQWRKG KWEEGKNWVN NDSNAGWEEV IGSNYTELVS WYETVVTCDA NQWQACYASS PPPGYCDDYC TDQVYHSYTV YHDYPSDGVV TQRSATNDGG SWQGIHLEAP NTNHGEFKRP DRVRPTLDWV FNNGDQSGHF QIDLR
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