| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0879 |
|---|
| Symbol | |
|---|
| ID | 8224448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1039825 |
|---|
| End bp | 1040184 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644928745 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003085299 |
|---|
| Protein GI | 255034678 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.399174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.958869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAA GAAAGACAAT GCCCAACCTG AATTGCGGGC TCGACCTGAT CGGTGAAGTG
CTTTACGGCA AGTGGAAGAT GCGGCTTTTG TGGTTTATCA ACGAGGGCTT TCAACGGCCC
AGCGAGCTGC AACGGAAAAT TCCGGATGCA TCCCGCCGGG TGTTGAATGT GCAGCTAAAA
GAACTAGAAA GTCACGAGCT GGTAGGGAAG GTGATTTACC CCGTCGTCCC GCCGAAAGTG
GAATATTACC TCACCGATTT CGGGAAATCA CTCATCCCCG TTATTGGTGC CATCGGACAG
TGGGGCGACC AGCATGAGCA GCGCTTGCGG ACGCTTATTG AAGCGAACAT TCAGTCTTAG
|
|---|
| Protein sequence | MYERKTMPNL NCGLDLIGEV LYGKWKMRLL WFINEGFQRP SELQRKIPDA SRRVLNVQLK
ELESHELVGK VIYPVVPPKV EYYLTDFGKS LIPVIGAIGQ WGDQHEQRLR TLIEANIQS
|
|---|
| |