Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0867 |
Symbol | |
ID | 8224436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1030109 |
End bp | 1030975 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644928733 |
Product | Integrase catalytic region |
Protein accession | YP_003085287 |
Protein GI | 255034666 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.507483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTTTCA ACCTGTCGAG GACGAATAAA GTAAGCTACC TATGTCGATT ATTCGACGTT AGCAGAACGG CCTACTACCG ATACAGGCGC GGAGAAAGTC ATAATGCGGA CAAGAAATAT AACCGTCCAA AGCATGAAGT TCGGATCGAA TTTATCCGGA ACATGAAACG CTACGGCAGT CGACGAATCA AGGAATCCTT GAAGCAAAAA GGCATCAGAA TCGGCCGTCG AAAGGTGGTT GAAATCATGC GAAGAGAGGG TTTGAAAGCG ATCCAGCCTC CCAGATTCAT TCCAAGGACT ACTGACAGTA AACACGGCAA ACGGATTTGC GATAATCTGC TTCTCGATCA GCCAAAGCCG GATCACCCCG ATGCGATATG GGTGTCGGAT ATTACCTACA TGCCACTAAA AGGTGGTAAA TGGGCATATT TGTGTATCTG GATGGATCTG TTCTCTCGCC AGATTGTCAG TTGGAAGCTT GATGAGAATA TGCAGGAAAA TCTGGTGAGG GAGCCATTGG AAAAAGCGCT GTTGAAGCGA GGAATTAAGC CTGGTCTAAT AATTCATTCT GACCGGGGAG GTCAATATCT GTCACGTAGA ATGAAGCAAG TAGTCAAAAC TTTCAGATTG AAACAAAGCA TGTCGCGAGC TGACGATCCC TACGACAATG CCTGTGCGGA GTCATTGTGG AGTCGATTAA AGGCCGAACT GAGTATTCCC AAAGGAGGAT ATATCAACCT CGAGGTATTG AGATCCGTAC TTTTTGAATA CATCGACGGG TATTATAACA CCCGGAGGTT ACATTCCTCT TTAAATTACC GAAACCCCGT AGCATTCGAA ACTGAATACT ACCGAAAAAC TGGTTAA
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Protein sequence | MIFNLSRTNK VSYLCRLFDV SRTAYYRYRR GESHNADKKY NRPKHEVRIE FIRNMKRYGS RRIKESLKQK GIRIGRRKVV EIMRREGLKA IQPPRFIPRT TDSKHGKRIC DNLLLDQPKP DHPDAIWVSD ITYMPLKGGK WAYLCIWMDL FSRQIVSWKL DENMQENLVR EPLEKALLKR GIKPGLIIHS DRGGQYLSRR MKQVVKTFRL KQSMSRADDP YDNACAESLW SRLKAELSIP KGGYINLEVL RSVLFEYIDG YYNTRRLHSS LNYRNPVAFE TEYYRKTG
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