| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0839 |
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| Symbol | |
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| ID | 8224408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1001253 |
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| End bp | 1002167 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644928707 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003085261 |
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| Protein GI | 255034640 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.177477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.189843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAATT GGACGACAGC TGACATTCCA CGCACAAATA GTGGTTTAGC TATCATTACA
GGCAGCACGG AAGGCATCGG ATTTGAAGAC GCACTGGCAC TTGCGTCAGC AGGGTGGAAT
GTCACATTAA TGGGACGCAA TCCTAGGAAA GGCACGGAAT CTACCGCCAG GATTAAACAG
GTTAACCCCC TAGCAAAAGT GAGTTTCGAG CAAATAGACC TGGCGGATCT TTCATCAATC
AAATCATTTG CTTCGAGAAT GATTTCAAAA GGGCAAGCGA TTGATCTTCT TATTAACAAT
GCTGGCGTTA TGACGCCGCC AAAGCGGCTT GAAACTGCCG ATGGCTTTGA GTTACAATTC
GGCACAAACC ACATTGGTCA CTTTGCATTG ACCGCACAAC TTCTCCCATT ACTACGCAAA
TCGCGGGAAG GGCGCGTAGT GACCGTTTCG AGTATAGCAA ATCGGGAGGG AACAATCAAT
TTTGACGACC TTCAATCGAA ATCTGCGTAT GCGCCCGGGA AAGCATACAG TCAGTCCAAA
TTGGCGAACC TAATGTTTGC CTTAGAGCTT CAACGGCAAA GCGAAAAGCA TGGTTGGGGC
GTTACAAGCA TCGCCGCTCA TCCGGGTGTT TCCCGAACCA ATCTGCTGAT TACAGGCGCT
GGGCGCTGGA GTGCCGCAGG AATGGCGCGG ACTTTTCTTC CATTTTTGTT CCAGCCATCC
GCACAGGGAG CCTTGCCAAC ATTGTATGCG GCTACATCTC CGCAGGCCAG GGGAGGCGCA
TATTACGGAC CAGACAGATT GATGGAGACC CGGGGATTTC CAGCTATCTC GAAAATACCA
GCACAAGCAG AGAATGCAGA TGACTCTTTA GAATTATGGG AGATATCCAA AGCGTTAGCC
AAAGTTGAAT TTTAA
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| Protein sequence | MKNWTTADIP RTNSGLAIIT GSTEGIGFED ALALASAGWN VTLMGRNPRK GTESTARIKQ
VNPLAKVSFE QIDLADLSSI KSFASRMISK GQAIDLLINN AGVMTPPKRL ETADGFELQF
GTNHIGHFAL TAQLLPLLRK SREGRVVTVS SIANREGTIN FDDLQSKSAY APGKAYSQSK
LANLMFALEL QRQSEKHGWG VTSIAAHPGV SRTNLLITGA GRWSAAGMAR TFLPFLFQPS
AQGALPTLYA ATSPQARGGA YYGPDRLMET RGFPAISKIP AQAENADDSL ELWEISKALA
KVEF
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