Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0834 |
Symbol | |
ID | 8224403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 994690 |
End bp | 995499 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644928702 |
Product | cyclase/dehydrase |
Protein accession | YP_003085256 |
Protein GI | 255034635 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.179759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAA TCAAAATCAG AACATCTGAA TTCATCGACC GTGGGGTGAT CAAGCCGCTT CCGACGGGTT CGTCTTACAT GAATGTGGGT TCCACCGAAC GGATTGTATC CGCTGCGGTT GGGCTGGCGC TGATGTATTT CGGCTTACGG AAATTTTCGA TACCCGGCCT GCTGGCAGGT GCCGCGGGTG CGGCTCTACT TGAAAGAGGC GCTTCCGGCT ATTGTCCGGT GAACAATCTC GCACAAAGGG GGCCGGCCAA AAAGCCCGTC GAATCGGCGG AGATTACCAA AAGCCTCACC ATCAACAAGC CGAGGACGGA GGTGTATCAG TACTGGCGCA AGCTTGAAAA TCTGCCCACA TTCATGCAGC ATCTTGAATC GGTAAGTCAG ACGGACGAAA GAAGGTCGCA CTGGGTCGCG CTCATTCCGG GCGGCGTCGG GAAAATTTCC TGGGATGCGG AGATCGTGGA AGAAGTTGAA AATGAAAAGC TGAGCTGGCG ATCGGTGCTC TATGCGGCTG TGGATAATTC CGGAGAAGTT TTGTTCAAAG ACGCGCCCGG CGACCAGGGG ACAGAGATTT ACGTGATTAT CAAATATTTG CCGCCCGCAG GCGCCATTGG TACTGCCGTT GCCAAGCTCT TCAATCCTGC TTTCAAACAA ATGGTGAAAG AGGACCTGCG CCGATTTAAA CGGCTCATCG AAACCGGTGA AATTCCTGTT AGCGAAGCGC AGCCATCGGG CAAGAAGGTG AAATTTGGAG ATACTACGCA CGACAAAATC GAAAAAACCT ATGAAAGCCC TTTGTTATAA
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Protein sequence | MATIKIRTSE FIDRGVIKPL PTGSSYMNVG STERIVSAAV GLALMYFGLR KFSIPGLLAG AAGAALLERG ASGYCPVNNL AQRGPAKKPV ESAEITKSLT INKPRTEVYQ YWRKLENLPT FMQHLESVSQ TDERRSHWVA LIPGGVGKIS WDAEIVEEVE NEKLSWRSVL YAAVDNSGEV LFKDAPGDQG TEIYVIIKYL PPAGAIGTAV AKLFNPAFKQ MVKEDLRRFK RLIETGEIPV SEAQPSGKKV KFGDTTHDKI EKTYESPLL
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