Gene Dfer_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0834 
Symbol 
ID8224403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp994690 
End bp995499 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content52% 
IMG OID644928702 
Productcyclase/dehydrase 
Protein accessionYP_003085256 
Protein GI255034635 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.179759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAA TCAAAATCAG AACATCTGAA TTCATCGACC GTGGGGTGAT CAAGCCGCTT 
CCGACGGGTT CGTCTTACAT GAATGTGGGT TCCACCGAAC GGATTGTATC CGCTGCGGTT
GGGCTGGCGC TGATGTATTT CGGCTTACGG AAATTTTCGA TACCCGGCCT GCTGGCAGGT
GCCGCGGGTG CGGCTCTACT TGAAAGAGGC GCTTCCGGCT ATTGTCCGGT GAACAATCTC
GCACAAAGGG GGCCGGCCAA AAAGCCCGTC GAATCGGCGG AGATTACCAA AAGCCTCACC
ATCAACAAGC CGAGGACGGA GGTGTATCAG TACTGGCGCA AGCTTGAAAA TCTGCCCACA
TTCATGCAGC ATCTTGAATC GGTAAGTCAG ACGGACGAAA GAAGGTCGCA CTGGGTCGCG
CTCATTCCGG GCGGCGTCGG GAAAATTTCC TGGGATGCGG AGATCGTGGA AGAAGTTGAA
AATGAAAAGC TGAGCTGGCG ATCGGTGCTC TATGCGGCTG TGGATAATTC CGGAGAAGTT
TTGTTCAAAG ACGCGCCCGG CGACCAGGGG ACAGAGATTT ACGTGATTAT CAAATATTTG
CCGCCCGCAG GCGCCATTGG TACTGCCGTT GCCAAGCTCT TCAATCCTGC TTTCAAACAA
ATGGTGAAAG AGGACCTGCG CCGATTTAAA CGGCTCATCG AAACCGGTGA AATTCCTGTT
AGCGAAGCGC AGCCATCGGG CAAGAAGGTG AAATTTGGAG ATACTACGCA CGACAAAATC
GAAAAAACCT ATGAAAGCCC TTTGTTATAA
 
Protein sequence
MATIKIRTSE FIDRGVIKPL PTGSSYMNVG STERIVSAAV GLALMYFGLR KFSIPGLLAG 
AAGAALLERG ASGYCPVNNL AQRGPAKKPV ESAEITKSLT INKPRTEVYQ YWRKLENLPT
FMQHLESVSQ TDERRSHWVA LIPGGVGKIS WDAEIVEEVE NEKLSWRSVL YAAVDNSGEV
LFKDAPGDQG TEIYVIIKYL PPAGAIGTAV AKLFNPAFKQ MVKEDLRRFK RLIETGEIPV
SEAQPSGKKV KFGDTTHDKI EKTYESPLL