Gene Dfer_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0823 
Symbol 
ID8224392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp982239 
End bp983147 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID644928694 
Productglycoside hydrolase family 43 
Protein accessionYP_003085248 
Protein GI255034627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.328209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC ATATTGAAAT ACCGGATGGT AATCCCATCA TCAAACACAT TTATACCGCC 
GATCCGACGG TGCTTGTTCA CGAGAACAAA ATTTACCTGT ACACAGGGCA TGATGATCCA
CCAGCTGGCG TGAACGATTA TGTTATGAAT GACTGGCTAT GCTTCTCATC GGAAGACCTG
CTGAATTGGA AATCCCATGG GGCGTTGATG AAAGCGGTTG ACTTTGCCTG GTCAAGCGGA
GACGCCTATG CATCGAAAGT TATTCAAAAA GACAAGCAGT TTTTTTGGTA TGCAGCTGTA
AGTCATGGCA GCATTGCCGG AAAGGCGATC GGCGTTGCAG TAGCCGACAA TCCGCTGGGC
CCTTTCGTCG ACGCCAGAGG GACAGCGCTG ATTGACCACG AAATGATCCC TGAAACTGAA
AACCTGAAAG CCAATCTTGA TCCGACTGTC ATCATTGACG ATGACGGGCA GGCCTATATT
TTCTGGGGGA GTAAAGTGTG CTATTGGGCC AGGTTGAAGG GCTCTATGGT GGAGCTGGAC
GGCCCGATCG GCACCATCGA TCTTCCGCAA TTTGCGGAAG GCGCTCATCT GCACAAGCGT
GGCGCACGCT ACTATCTAAG CTATGGATAT GGCATGCCGG AAAGAGTGGC GTATGCAGTG
AGTGACAGCA ATCAAGGTCC GTGGAAATTT ATGGGCATCA TCAATGAAGT AGCCGGTAAC
TGTGAAACCA ACCGTCCGGC GATTATTCAT TTTCAGGGTA ATGATTATTT CTTTTACCAC
AACGGCACCC TGCCCGGAGG CGGAAGTCAT CGGCGGTCGG TGTGTGTTGA CAGGCTATTT
TATGAAAATG ACGGGTTGAT CAGGCCCGTA CAGATGACGT CCGGCGGGCT ATTGCAGGCG
AGCTTTTGA
 
Protein sequence
MSDHIEIPDG NPIIKHIYTA DPTVLVHENK IYLYTGHDDP PAGVNDYVMN DWLCFSSEDL 
LNWKSHGALM KAVDFAWSSG DAYASKVIQK DKQFFWYAAV SHGSIAGKAI GVAVADNPLG
PFVDARGTAL IDHEMIPETE NLKANLDPTV IIDDDGQAYI FWGSKVCYWA RLKGSMVELD
GPIGTIDLPQ FAEGAHLHKR GARYYLSYGY GMPERVAYAV SDSNQGPWKF MGIINEVAGN
CETNRPAIIH FQGNDYFFYH NGTLPGGGSH RRSVCVDRLF YENDGLIRPV QMTSGGLLQA
SF