| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0808 |
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| Symbol | |
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| ID | 8224377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 955618 |
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| End bp | 957021 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928679 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003085233 |
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| Protein GI | 255034612 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA ATATCATTGC AGCCATGGTG CTGGCGACCA CGCTGGCATC CTGCACGGTC
GGCAAGCGTT ATGAGCGCCC CAACCTGGAA CCGCCTGCCG CGTTCCGCGC CGCCATGCCG
GTAACGTCAG ATACCGTACA GCTTCCCTGG CGCACCTTTT TCCGCGAACC ACAACTGGTG
GGCCTCATTG AAAAAGCGCT TGAAAGGAAT AATGACATTG CCATCGCCCT CAAAAACATC
GAACAGATGG ACCTGGCGGT GAAGCAAGCC AGACTGGCGC TTTTGCCGAC GCTGAATTTT
TCAGCGGGCG CAAGCAGGTC ATGGTTGTCG AAAAACTCCT TAAATGGCTC GTTGAGTGAG
CAGTTTGTGG GGACAACTTA CATGGACGAC TACAATGCAT CATTGCAGCT TTCGTGGGAA
GTAGACGTTT GGGGCAAAGC AAAAATGCAG AAGGAAGCCG CTATTGCTAA TTATTTTGCG
CAAAAGGAAA ATGTATCTGC GCTTAAAACC CGCATTATCA GCCAGGTAGC CCAGTCTTAT
TACAACCTGA TCAGCCTGGA CCAGCAGCTC AAAATCGCCA ACCAGAACAT TGTCCTCAGT
GACAGTACGC TGGATATGAT GCGGCTGCAA TTCAATGCCG GGCAAATCAC CTCGCTGGCC
GTAGACCAGG CCGAAGCCCA GAAGAAAACC GCCGAGCTGC TTATCCCGCT TGCCTTGCAG
AACATCGCCG TGCAGGAAAA CGCATTGAGC ATCCTTTGCG GCAGCTATCC GGACGCCATT
CAGCGTGCCG GTGACCTGTC GAATGCCATG CCCGAGGAGA CTTTTGCGGC ATCAGTCCCT
GCCCAGCTGC TCAGCCGCAG GCCCGACGTG AAAGCGGCCG AGCTGGCGGT AGTCAGCCTG
AATGCCCAAA CGGGGCTTGC GAAAGCGGCC ATGTACCCGG CCCTGAGCAT TTCACCGCAG
GTTGCGGCCA ACTCTTTCAA TTTCAATAAA TGGTTTGACC TGCCCGGCTC ACTGACCAAA
ACGCTGGCCG CCAACCTGAC GCAGCCCATC TTCCAGAAGC GCGCCTTGAA AACGGCCTAT
GAAACGGCTG TTGTGGAGCA GGAAAAAGCG GTGATCCAAT ATAAACAAAC GTTAATGAGC
GCGGTAGGCG AGGTGTCGGA CGCCATGGCC AAGTCAAGCG GCGCTTCACA GAGACTCGAA
CTGGTGCAGC AAAAAACAGC GATGCTCAAT AAGGCCACAG AAGATGCCCA AAAACTGTAT
AAGAGTGGAA TGGCCAACTA TCTGGAAGTA ATCACGGCCC AAAACAGCAG GCTGCAAAAT
GACCTGGAAG CGATCAATAT CCAACTTGAA AAACTCAACG CGGTTACGGA TCTGTACAGG
GCGCTGGGGG GAGGCGTAGA GTAG
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| Protein sequence | MNKNIIAAMV LATTLASCTV GKRYERPNLE PPAAFRAAMP VTSDTVQLPW RTFFREPQLV
GLIEKALERN NDIAIALKNI EQMDLAVKQA RLALLPTLNF SAGASRSWLS KNSLNGSLSE
QFVGTTYMDD YNASLQLSWE VDVWGKAKMQ KEAAIANYFA QKENVSALKT RIISQVAQSY
YNLISLDQQL KIANQNIVLS DSTLDMMRLQ FNAGQITSLA VDQAEAQKKT AELLIPLALQ
NIAVQENALS ILCGSYPDAI QRAGDLSNAM PEETFAASVP AQLLSRRPDV KAAELAVVSL
NAQTGLAKAA MYPALSISPQ VAANSFNFNK WFDLPGSLTK TLAANLTQPI FQKRALKTAY
ETAVVEQEKA VIQYKQTLMS AVGEVSDAMA KSSGASQRLE LVQQKTAMLN KATEDAQKLY
KSGMANYLEV ITAQNSRLQN DLEAINIQLE KLNAVTDLYR ALGGGVE
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