Gene Dfer_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0805 
Symbol 
ID8224374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp949760 
End bp950857 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content47% 
IMG OID644928676 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_003085230 
Protein GI255034609 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGTA CAGAAAATAA GTTTATCACC ACCCGAAGCA AGTCTATCGT CCTTGCTTCA 
TTCTCGTTTG TGATGTTTTA CGTTTTCACC TACATGCTTG ATCCGCGGGA TGTATGGTGG
ACGAATTACT TCAACCGGCC GATCAATGAG ATGCTGGCAG AGTGGATCCT GACTTTATTG
TTTTGTGTAT TAATATCCCT GGGGAGCGTT TCCATCCATG CAAGACTAAA CCGGTTTATC
CCATGGCTTG AAAAGCCCCG GAGACGATTG CTGCTGGAAA CTGTGCTGAA TATTTCCTTT
GTGGTCCTGC TTATCATTTT GCTCGTCGTG CTCATCAGGG CATTACCACA GAATGCCAAT
GCATCTACCA GCGAGGAGGA TATAGCAAGT TTTTGGCAGG CAGTGACGGT GAGCATTTTC
ATGGCGCTCA TTATCAGCGC CGTGCATACC GGCGATTACC TGATCACCAA CTGGAAGAAT
GCCGCGCTCG AAGCGACGCA GCACAAACTC AAATCCGCCC AGCACAAGCA GGCAGCGGCC
GAAGCAGAGC TCGAAGCGCT CAAATTGCAG ATTGATCCCC ATTTTGTATT TAATAACCTG
AGTGTCCTTT CCGAACTGAT CCTGGAAGAC CAGCAACTGG GCTATAATTA CTCGGAAAAT
TTCGCCAAGG TTTACCGGTA TCTTTTAACG AATTCAAAAA AAGACCTGAT CAAATTGGAC
GATGAAATGA AATTTCTGAA TGCGTATATT TTCCTGCTCC GGCAGCGTGC AGGAAATGGC
ATCGCCTTCG AGATCGACAT CAACCCCTCC CATCTTGCAT TACAACTTCC TCCGATGACC
GTGCAGCTTC TGATCGAAAA CGCGATGAAG CACAACCAGT TTGTAAAAAC CAACCCGCTG
AGAATTGAAA TAAAAAGCGG CGTAGAAATG GACCTGATCA TTTCCAACAC CGTGATACCA
TTGCAGAAAA AGGAAGAATC GTCCGGTTTA GGCCTTAAAA ACATTCGCGA GCGGTATTTG
CTATTATCGG ATCGCGAGCC GCATATCAGC GCCAGCGACA CCCGGTTTTC CGTATCGATA
CCCCTGATAA AATCATGA
 
Protein sequence
MESTENKFIT TRSKSIVLAS FSFVMFYVFT YMLDPRDVWW TNYFNRPINE MLAEWILTLL 
FCVLISLGSV SIHARLNRFI PWLEKPRRRL LLETVLNISF VVLLIILLVV LIRALPQNAN
ASTSEEDIAS FWQAVTVSIF MALIISAVHT GDYLITNWKN AALEATQHKL KSAQHKQAAA
EAELEALKLQ IDPHFVFNNL SVLSELILED QQLGYNYSEN FAKVYRYLLT NSKKDLIKLD
DEMKFLNAYI FLLRQRAGNG IAFEIDINPS HLALQLPPMT VQLLIENAMK HNQFVKTNPL
RIEIKSGVEM DLIISNTVIP LQKKEESSGL GLKNIRERYL LLSDREPHIS ASDTRFSVSI
PLIKS