Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0805 |
Symbol | |
ID | 8224374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 949760 |
End bp | 950857 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644928676 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003085230 |
Protein GI | 255034609 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGTA CAGAAAATAA GTTTATCACC ACCCGAAGCA AGTCTATCGT CCTTGCTTCA TTCTCGTTTG TGATGTTTTA CGTTTTCACC TACATGCTTG ATCCGCGGGA TGTATGGTGG ACGAATTACT TCAACCGGCC GATCAATGAG ATGCTGGCAG AGTGGATCCT GACTTTATTG TTTTGTGTAT TAATATCCCT GGGGAGCGTT TCCATCCATG CAAGACTAAA CCGGTTTATC CCATGGCTTG AAAAGCCCCG GAGACGATTG CTGCTGGAAA CTGTGCTGAA TATTTCCTTT GTGGTCCTGC TTATCATTTT GCTCGTCGTG CTCATCAGGG CATTACCACA GAATGCCAAT GCATCTACCA GCGAGGAGGA TATAGCAAGT TTTTGGCAGG CAGTGACGGT GAGCATTTTC ATGGCGCTCA TTATCAGCGC CGTGCATACC GGCGATTACC TGATCACCAA CTGGAAGAAT GCCGCGCTCG AAGCGACGCA GCACAAACTC AAATCCGCCC AGCACAAGCA GGCAGCGGCC GAAGCAGAGC TCGAAGCGCT CAAATTGCAG ATTGATCCCC ATTTTGTATT TAATAACCTG AGTGTCCTTT CCGAACTGAT CCTGGAAGAC CAGCAACTGG GCTATAATTA CTCGGAAAAT TTCGCCAAGG TTTACCGGTA TCTTTTAACG AATTCAAAAA AAGACCTGAT CAAATTGGAC GATGAAATGA AATTTCTGAA TGCGTATATT TTCCTGCTCC GGCAGCGTGC AGGAAATGGC ATCGCCTTCG AGATCGACAT CAACCCCTCC CATCTTGCAT TACAACTTCC TCCGATGACC GTGCAGCTTC TGATCGAAAA CGCGATGAAG CACAACCAGT TTGTAAAAAC CAACCCGCTG AGAATTGAAA TAAAAAGCGG CGTAGAAATG GACCTGATCA TTTCCAACAC CGTGATACCA TTGCAGAAAA AGGAAGAATC GTCCGGTTTA GGCCTTAAAA ACATTCGCGA GCGGTATTTG CTATTATCGG ATCGCGAGCC GCATATCAGC GCCAGCGACA CCCGGTTTTC CGTATCGATA CCCCTGATAA AATCATGA
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Protein sequence | MESTENKFIT TRSKSIVLAS FSFVMFYVFT YMLDPRDVWW TNYFNRPINE MLAEWILTLL FCVLISLGSV SIHARLNRFI PWLEKPRRRL LLETVLNISF VVLLIILLVV LIRALPQNAN ASTSEEDIAS FWQAVTVSIF MALIISAVHT GDYLITNWKN AALEATQHKL KSAQHKQAAA EAELEALKLQ IDPHFVFNNL SVLSELILED QQLGYNYSEN FAKVYRYLLT NSKKDLIKLD DEMKFLNAYI FLLRQRAGNG IAFEIDINPS HLALQLPPMT VQLLIENAMK HNQFVKTNPL RIEIKSGVEM DLIISNTVIP LQKKEESSGL GLKNIRERYL LLSDREPHIS ASDTRFSVSI PLIKS
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