| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0796 |
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| Symbol | |
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| ID | 8224365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 939986 |
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| End bp | 941065 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644928667 |
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| Product | Endo-1,4-beta-xylanase |
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| Protein accession | YP_003085221 |
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| Protein GI | 255034600 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000650557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.101178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAT TCAAATTGCA TTCATTCATT CGTTATATCG CTGTCGGCGC TGCAATGCTC
CCGTCCGATG TTTTTGCGCA AAAAACACTC AAAGAGGCCT ACAAAACGTA CTTCCCAATT
GGTGTAGCGG TGGCCCCCAG AAGCTTGTTA GGCCCGGAGT CCGAGCTTAT AAAAGCGCAG
TTCAGTAGCA TCACCCCGGA GAATGCGATG AAGATGGGGC CTATTCATCC CGAGCCAAAC
CGTTATGACT GGCGCGATGC GGATGCCATC GTCGCGTTCG GTCAGGCAAA CAATATGCTG
GTCAGGGGGC ACACCTTGTG CTGGCACAGC CAGGCGCCCC GATGGTTTTT TACAGATGCC
CAGGGACAGC AGGTTTCCAG AGAAGAGCTG CTGGCGCGTT TAAAACAGCA CATTACAGAC
GTCGTGAGCC GGTACAAGGG TAAAATTTAT GCCTGGGATG TCGTCAACGA AGCGGTGCCG
GATACGGGAA ACAGTATCTA TCGTTCGTCA AAGTTTTATC AGATCATTGG TGAAGAGTAC
ATCGAAAAAG CATTCGAATA TGCCCACGCG GCCGATCCGG ATGCCAAACT GTTTTACAAT
GACTACAACA CAGAAAGCGC AGCAAAAAGG GAGAAAATTT ACCAACTGCT CAAAAAGCTG
AAAGCGAAAA AGATTCCGGT GCACGGTGTC GGGTTGCAGG GGCATTGGTC GATCTACGAG
CCGACCCGGC AGGAGCTCGA AAAGTCGATC GAGGACTTTG CCAGTCTGGG CCTGGCCGTT
CAGATTACGG AGCTGGATGT TTCGGTGTAT CCCAAAGAGC ATGAGCGCCG TAAGAAAAAC
GAACTTGACA AAGCCATTTA TACCGATGAA ATGATGCAGA AGCAGTCCGC CCATTATCAA
ATGCTTTTTG ATACATTCCG CAAATACAAA AGCACGGTAA CTGGCGTCAC TTTCTGGAAC
GTATCGGACC GGTCGAGTTG GCTGGATAAC TTCCCGGTTC AGGGGCGTAA AGACTTCCCC
TTGCTGTTTG ACCAGCATTA CAAACCTAAG CAGGCCTTTG AGGGGGTAGT GAATTTTTGA
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| Protein sequence | MKLFKLHSFI RYIAVGAAML PSDVFAQKTL KEAYKTYFPI GVAVAPRSLL GPESELIKAQ
FSSITPENAM KMGPIHPEPN RYDWRDADAI VAFGQANNML VRGHTLCWHS QAPRWFFTDA
QGQQVSREEL LARLKQHITD VVSRYKGKIY AWDVVNEAVP DTGNSIYRSS KFYQIIGEEY
IEKAFEYAHA ADPDAKLFYN DYNTESAAKR EKIYQLLKKL KAKKIPVHGV GLQGHWSIYE
PTRQELEKSI EDFASLGLAV QITELDVSVY PKEHERRKKN ELDKAIYTDE MMQKQSAHYQ
MLFDTFRKYK STVTGVTFWN VSDRSSWLDN FPVQGRKDFP LLFDQHYKPK QAFEGVVNF
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