| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0795 |
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| Symbol | |
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| ID | 8224364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 938932 |
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| End bp | 939972 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928666 |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003085220 |
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| Protein GI | 255034599 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000173963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0629112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTT TCAACAAACT TTTGATTGCC TTCGCTGCCG GAACCGGCAG CCTTTATGCG
CAGAATGATG CGGTGAAAAT CCAGCCTCTC GTGACTGATT TGTACACCGC CGATCCGTCT
GCACACGTTT TTAATGGTAA AATATACATT TATCCCTCCC ATGACGTCGA GGCGCACGTC
GCGCAGGATG ATGAGGGCGG GCATTTCCAG ATGCGCGACT ACCACGTGTA TTCGATGGAC
AAAATCGGGG GAAAGGTGAC GGACCACGGC CGTGTACTGG ATGTGAAGGA TGTGCCCTGG
GCCGATAAGC AGATGTGGGC GCCGGACGCC GCATTCAAAA ACGGGACCTA TTACCTGTAT
TTCCCTGCGA AAGACAAACA GGGTATATTC CGGATCGGCG TAGCCACCAG TAAATCCCCT
TCCGGGCCCT TCAAGGCGCA GCCCGAGCCT ATTGCAGGGA GTTACAGCAT TGATCCGGCG
GTATTCACCG ACGCTGACGG CAAAAGCTAC ATGTACCTGG GCGGAATCTG GGGTGGGCAG
TTGCAGCGGT GGCATAGCGG CACATATGAC AAAACATTGA TGACCGATCT TGGCAAAGGC
CATGAGAACG AGTCGGCACT CAGCGCGAAA GTGGCGTTGA TGAGCGGTGA TATGTTATCC
TTCGCCGAGC CGCTCCGCGA CGTGCAGATC CTAGATACCA ACGGCAAGCC GCTGCTGGCC
GCCGATAACG ATCGCAGGTT CTTCGAGGGT GCCTGGATGC ACAAATACAA TGGGAAATAT
TATTTCTCGT ATTCGACAGG TGATACACAT TTGCTATGCT ACGCGGAAGG CAGCTCGCCG
TATGGTCCAT TTACCTACAA GGGCGTCATT ATGAACCCCG TCGAGGGCTG GACCACACAC
CATTCCATCG TGGAATTCGA TGGAAAGTGG TATTTGTTTT ATCACGATTC AGCGCTTTCT
GGCAAAACGC ACCTGCGGAA TGTGAAAGTA AGGGAGCTGC TCCGGGACGA GGCCGGAAAC
ATTAAGACCA TTAACCCGTG A
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| Protein sequence | MISFNKLLIA FAAGTGSLYA QNDAVKIQPL VTDLYTADPS AHVFNGKIYI YPSHDVEAHV
AQDDEGGHFQ MRDYHVYSMD KIGGKVTDHG RVLDVKDVPW ADKQMWAPDA AFKNGTYYLY
FPAKDKQGIF RIGVATSKSP SGPFKAQPEP IAGSYSIDPA VFTDADGKSY MYLGGIWGGQ
LQRWHSGTYD KTLMTDLGKG HENESALSAK VALMSGDMLS FAEPLRDVQI LDTNGKPLLA
ADNDRRFFEG AWMHKYNGKY YFSYSTGDTH LLCYAEGSSP YGPFTYKGVI MNPVEGWTTH
HSIVEFDGKW YLFYHDSALS GKTHLRNVKV RELLRDEAGN IKTINP
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