| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0793 |
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| Symbol | |
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| ID | 8224362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 933667 |
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| End bp | 936819 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928664 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085218 |
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| Protein GI | 255034597 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.795516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0167144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGACT GTTTATTAAA CCGTAATGCG CTGGCCAGGA TCGCGGGCAT TTGTGGCCTG
CCGGTATTGT TGCTGGCAGC AGCACCGCAT GATGCCATTG CCGGACGCGC GCCGATCGCC
GACTACAACA GCAGGCACCG GGCTGCGCCG GTGGCCGAAG TGGAGATTAC CGGTAAAGTT
ACCGGCGAGG ACGGCGAAGG ATTACCCGGC GCCAGTGTGC TGGTTAAATC TACCACCACT
GGTACAATCA CCGACGCGGA CGGTAATTTC AAACTGCGTG TGGCCGACGG AGCAAATGCC
GTTTTAGTCA TCTCCCTGGT GGGGTATGTT TCCCAGGAAA TCCCGGTTGG CACCCAGAAG
GTGATAGACG TCCTGCTTAA AACCGATAAC AAGGTTTTGG AGGAAGTAGT AGTGGTGGGC
TACGGGACCC AGCGCCAGGA AGCAGTGACG GGGTCTGTGG TTTCGGTCTC GGGTGACATT
ATGCGGCAAG TTCCCTCTTC GAACCTCTCG CAGGCGTTGC AAGGCCGGGT AGTGGGTGTT
GAAATTTCCC AAACATCGTC GAAACCAGGC TCGGCCATGC AGATCCTGAT CAGGGGCCAA
CGTTCACTGA GGGCGGATAA TAACCCGCTG ATCGTGCTCG ACGGGATACC ATTCGCCGGC
TCGCTGACCG ACATCAACCC GAACAGCATC AAAAGCCTGG ACATTCTCAA AGACGCTTCG
GCAACGGCTA TTTATGGTTC AAGGGGTGCC AATGGGGTGA TTCTGATCAC GACCAACACC
GGAAAGCGCG GGCAGAAGGC ACAGTTCAGC TATAATGGCT TTCATGGGGT GACTACCGTT
TTTGCCAAAT ATCCCATGAT GAACGGGCCC GAGTTTGCGG CACTTCGCGC GGCCAGCATT
CAGAAATTCC AGAATACGAT CGACGAGTCC AACGATGTCA ATACGGATTG GCAGGATATG
ATTTACCGGA ACGGGATGAT GACAAGCCAT GATCTGAGTG TTTCAGCGGG TACGGAGAAG
GGCAGCTATT CGTTCGGGCT GGGATATTAC AAGGAGAATG CGGTGGTGCC TTTGCAGAAC
TTTACCCGTT ATTCGCTGCA AGGGTCTGTG GACCAGGATA TCAACAAATA CTTTAAAGTC
GGATTGTCGA CCAACTCGAA CTTTACGATC AACAACGGAA ACGGCGTGCC GGCAGTAGGA
ATGGCTTTGG CCCGAACGCC GATCACCAAT CCTTACAATG CCGACGGAAG CATGAAAACC
ATCGTTCAGG AGCAGACTTC CGGGCCGCAA TGGGTTCCTT CCCGGCAGCG GTTCAACAGC
CTGGGCGATG CCTATGTGGA TCAGACGAAG GCATACGGAT CTTATAACAC CGTGTTTGCG
GAAATCAGGG TTCCCGGGGT AACCGGGCTT AAATACCGGG CTAACCTGGG TCTTAATTTC
CGGCAAAGCA GCGGCGGGAA TTACACCGGG CAGGGGGTAT TCAGCGGCAA TGTCCAAAAC
GTTTCAACGG CGGGTATCAA CAATTCACTT ACCACCAACT GGGCCATTGA AAACCTTTTG
AGCTACGACA AGACCTTCAA GAAGCATATT ATCAATGCGG TTGCGCTCTA TTCCGCCCAG
CAGAATACGT CCAGCAACTC CTCGGTCGGT GCCCGTGATA TTCCCTCGGA TGCATTTCAG
TTCTATAACC TCGGACGTGC CGACGGCATT ATTACGGTGA ATCCCGCCAA CCAGGGTTAC
AATCAATGGG GGCTGCTTTC CTATATGGGC CGGGTGATGT ACTCCTATGA CGACCGATAC
ATGCTCAGCG TCACTTACCG GGCAGACGGC TCCTCACGAC TTGCATCGGG TTACCAGTGG
AATGCCTATC CTGCCGTGTC CGCGGGCTGG AACATCTCGA AAGAAAACTT TATGAGCGGT
GTTACCCGGG TAAATCTTCT GAAACTGAGG GCCGGGTATG GGCAAACTTC CAACCAGGCG
GTGAATCCGT ATGAGACGCT GGGGCTGCTG GCGACAAGGC CCTATAATTT CGGCGATGAT
ACTTATTCGA CGGGATTCTA TGTGTCCAAC GCACCGAACC CGCGTCTGGG ATGGGAGTTT
TCCAATACAG TCAATTTCGG GGTTGATTTC AAGCTCTTCA ACAACCGGTT GTCGGGTACG
GTGGAATACT ACGAGCAGCA AACCAAAAAT GTGCTGCTGG GCGTAGGACT CCCGCCGACC
TCGGGGGTAG GAGGTTATAC CGCCAACATC GGGCAGACCG AGAACAAGGG CATTGAGCTA
AACCTGAATG GAACAATCCT GGAAAACGTC AATGGCTGGT CCTGGGACAT CGGGTTTAAC
ATCTACGGCA ACCGCAACAA GCTGGTTTCA CTGGCATCCG GTCAGCAGCG TGACGAAGGC
AACTGGTGGT TTGTCGGCCA TCCCATCAAT TCGATCTTTG ACTATGAAAA AGTAGGGCTC
TGGCAGGCCG ATGACCAGTA CCGGGATATT TACGAACCGG GCGGCAATGC GGGCATGATC
CGGGTCAAAT ACACCGGGGA CTACAATGCG GACGGAGCGC CAACACGGGC GATCAATGCC
AGCGACAGAC AGATTATCAG CATGCAGCCT GATTTTCAGG GCGGATTCAA TACGCATGTC
GCTTATAAAG GGTTCGATCT GGGTATTGTG GGTGCATTCA AAAGCGGGGG CTTGCTCAAT
AGCACGCTGT ACGGTTCGGG AGGGTATCTG AACAACCTGA ATGCACGCTC AGGCAACAAT
GTCAAAGTCG ATTACTGGAC GCCGGAAAAT ACATCTGCGA AATATCCTGC ACCGGGCGGT
ATCGGTGGCG ATAACCCCAA ATACGGCAGC ACGCTGGGCT ATTTCGATGC CTCATACCTG
AAAATCAGGA CAATGACGCT GGGCTATAAT CTGGATTCGA GGCAGCTTGA AAAGCTGGGG
ATTACCAGAC TACGGGTTTA TTTCACGGCT CAAAATCCCT TTGTAATGTT CTCTCCTTAC
CACCGGGAAT CGGGAATGGA CCCGGAAACA AACTCCTACG GAAATGAGAA TGCGGCAGTT
CCACTGTCGG GTGCGCTACG ACGTATACTC ACGATCGGCA CGAATACCCC TTCAACCCGG
AACTATCTGC TGGGCGTTAA TCTGACCTTT TAA
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| Protein sequence | MHDCLLNRNA LARIAGICGL PVLLLAAAPH DAIAGRAPIA DYNSRHRAAP VAEVEITGKV
TGEDGEGLPG ASVLVKSTTT GTITDADGNF KLRVADGANA VLVISLVGYV SQEIPVGTQK
VIDVLLKTDN KVLEEVVVVG YGTQRQEAVT GSVVSVSGDI MRQVPSSNLS QALQGRVVGV
EISQTSSKPG SAMQILIRGQ RSLRADNNPL IVLDGIPFAG SLTDINPNSI KSLDILKDAS
ATAIYGSRGA NGVILITTNT GKRGQKAQFS YNGFHGVTTV FAKYPMMNGP EFAALRAASI
QKFQNTIDES NDVNTDWQDM IYRNGMMTSH DLSVSAGTEK GSYSFGLGYY KENAVVPLQN
FTRYSLQGSV DQDINKYFKV GLSTNSNFTI NNGNGVPAVG MALARTPITN PYNADGSMKT
IVQEQTSGPQ WVPSRQRFNS LGDAYVDQTK AYGSYNTVFA EIRVPGVTGL KYRANLGLNF
RQSSGGNYTG QGVFSGNVQN VSTAGINNSL TTNWAIENLL SYDKTFKKHI INAVALYSAQ
QNTSSNSSVG ARDIPSDAFQ FYNLGRADGI ITVNPANQGY NQWGLLSYMG RVMYSYDDRY
MLSVTYRADG SSRLASGYQW NAYPAVSAGW NISKENFMSG VTRVNLLKLR AGYGQTSNQA
VNPYETLGLL ATRPYNFGDD TYSTGFYVSN APNPRLGWEF SNTVNFGVDF KLFNNRLSGT
VEYYEQQTKN VLLGVGLPPT SGVGGYTANI GQTENKGIEL NLNGTILENV NGWSWDIGFN
IYGNRNKLVS LASGQQRDEG NWWFVGHPIN SIFDYEKVGL WQADDQYRDI YEPGGNAGMI
RVKYTGDYNA DGAPTRAINA SDRQIISMQP DFQGGFNTHV AYKGFDLGIV GAFKSGGLLN
STLYGSGGYL NNLNARSGNN VKVDYWTPEN TSAKYPAPGG IGGDNPKYGS TLGYFDASYL
KIRTMTLGYN LDSRQLEKLG ITRLRVYFTA QNPFVMFSPY HRESGMDPET NSYGNENAAV
PLSGALRRIL TIGTNTPSTR NYLLGVNLTF
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