| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0792 |
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| Symbol | |
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| ID | 8224361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 929223 |
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| End bp | 933359 |
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| Gene Length | 4137 bp |
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| Protein Length | 1378 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644928663 |
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| Product | histidine kinase |
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| Protein accession | YP_003085217 |
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| Protein GI | 255034596 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.134077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCA CCATGCGATT AAAGCTGATT GCCACCATCA TTTTTGTCCT GTTCTTTGCT
TTCTTGGGGC GACTGACTTG CGTGGTTATG GCGCAGGCGC CCGAGCCCAA ATTCACCTCG
CTTACATCGA TGGACGGGCT GTCTTCCAAC ACGGTGACGG CAATTCTGAA AGACCGATAC
GGGTTGATGT GGTTCGCCAC GGATGATGGC TTGAACAGGT TTGACGGTAC AGACGTGCTA
ACCTACCGTC ACATGAAAAA CGAAATGTCC TCGCTGAGGT CAAGCGACAT CTCTTCGCTT
CATCAGGATC GGCAGGGCCG CATGTGGGTG GGAACGGTGG AAGGAGGCCT GCATCTGTAC
AACAGGCGCA AGGACCGCTT TGTGAGCGTG TCGTCACCAC ATAGCGTCAC CAGTATCGCA
AGCGACGCTT CCGGCAAGCT CTGGGTAGGC ACCACGGGCG GGCTGGTTAC CGTAAATCCG
GAGACGCTTC AGATGAGTAC TTTTTCATCC GCTCCCGAAA TACCTGACCA GATTTCCAAA
GGGCTTATTC TGAGTGTCAC AGTCGATCAC AGGAAGATCG TATGGATTGG CACCGATAAA
GGCCTGTTCA GCATTAATCC AAACGATCCT ACTTCGGAAC ACATCAATTA CCTTCAATCG
CTTCCCGACG AGGCGGGCGC ACGGTCCGTG AAGTCAGTCA TCGAGGATCA TGACGGAAAT
ATCTGGATCG GCACATTCAG CGGTCTTTAC AAGCTCGACT CCAATGGTCG GATCTTGCAA
AGCCACCATT ATGAGGCGGG CAATCACAGC TCACTGAGCA GCAATATGGT CTTCGCCATT
GCTGCTGAAA ACGGCCGCCG CCTCTGGATC TGCACGGATT CCGGCCTGAA TATCCTGGAC
GTGCCCACAG GCAAATTTAC CCGCTACGAA CCCGACACGC GAACGCAGTT CAGCCTCAGT
AACAAATCCG TGCGCAGCAT TCTGATTGAC GACGAAGGAA TCTGCTGGCT GGGGACCTAC
AAGGGGGGCG TCAACAAATA CGACAAGAAC CTGCCCATCT TCGGGTTAAA AAGGGCGGAT
GTAAACGATC CATACGGACT GAGCGCCCCC TTTGTAACAT CATTTGCCGA AAGCAGCTCC
GGAAAGCTTT TTGTAGGAAC CGATGGCGGA GGCGTGAGCC TTTACAACAG AGAAACCAAT
CTGTTCAAGC GCTTCGCGAT TAGTCCAAAA ACCCGCAAAG CGGCCTCAGG GCTTGCTATT
CTGTCGATGG AGCTGGCCTC AGAAACAGCG CTCTGGATAG GGACTTTTCA GGACGGCCTA
TTCCGGCTAA ATCCCAAGAC GGGCGCATAC ACGCAGTTCA CCAGTGGCAA AGACTCTGCC
TCGCTCAGCA ACAACGACAT TTTTGTCGTA AGAAAAGACC GGACAGGGAA GATATGGATT
GGTTCGAATG GCGGCGGACT GCACCAATTC GATCCTGCTA CCCAAAAATT CAAAAGGTTT
TATCGTCCCG GCGTGCCCAT GGCCGACAGG GTTATCCCGC TGAATGCATA CATCCGGGAC
ATTATCCAGG ACCGGGAAGG GTTGCTCTGG ATCGGTTCGC ACGGGACAGG CATTGCCGTG
TTTGATCCGG TAAGCCAGAC CTCCCGGCTG CTCAACAAAC AGAACAGTAA TTTGCCGAGC
AACATTGTGT ATTCCATTTT GGAAGACCGG CAGGGCAACA TCTGGGTGGG CACATCCGGT
GAGGGACTGG CGCTCTATAA TCCCCGGTCC AAAAGGTTTA CCACCTTTTC AGCAAAGGAA
GGGCTGGCCA GTAACATCGT CAACAAGGTT TTGGAGGATG CTCAGGGACG CATTTGGGTA
AGTACCAATC AGGGAATCAG CTATTTTGAT CCAAACAGCA GGAAATTCAC GAATTATACG
ACCTATAATG GAATACAAAA CAAGACATTC GTGTTGGGTT CGGGATTGAG GACCAAAGAC
AACACGCTTT TCTTCGGCGG AATCGATGGA TTCAACTACA TCGACACACG AAGCCTGCCC
TCCACCAAGA AAGGGGCTCC CATTATACTC AAAGATCTCC GAATTGGGAA CCACAACGTT
ACGTCGGCGG ACTCCAATTT CATTGATGCG GACATTTCGG TGGCCACAGC GATACGGCTC
AATTACAAGC AGAATTTCTC TATCGGCTTT GCCGCCCTGG ATTATACCAA CCCCCGACAA
ATCCAGTACC GCCACCGGAT GAAGGGCATG CAGTCCGAAT GGAACCACAC CGGCACCAAT
AACGTGGCCA GCTACACCAA TCTCAGCCCT GGCGACTATG TTTTTCAGGT ACAGGCCAGC
ACCGACGGTG TCAACTGGAA CGGGCATACC ACCTCCGTGG CTGTTGTAGT GGAACCGCCT
TTTTACCTGA CCATCTACGC CTATCTGCTG TATATCCTAA CCCCTTTTGT GATCGTACTC
ATCATGCGGC GCAGGGGAAT CAAGAAGCTC AAACGGGAAT TCCAGCGGCA GCAGCGCGAG
GCCGAAGAAC AGCAGGCACG CGAGCTTGAT AAGCTGAAAA TCAAATTCCT TACCAATCTG
AGCCACGAGT TCAGAACACC GATAGCGCTC ATTCTGGCCC CGATTGACAG TGTGCTTACC
AAAACACGGG AAACTGAGCT GCATGCGCCG GTTGTGGCCA TTAAACGAAA TGCCAAAAGG
CTGCTGAACC TGGTAGATCA TCTGCTGGAC TTCAAAAACA TGCAACAACA GGAACTGAGT
CTGGAGCTCG CCAGAAAGGA CATCGTTTCC TTCATTGAAG ATACTTGCGG TCAATTCAGC
GATCTGTTCG TGCGTAAAGG CATTAATTTC AGCGTCCAAA GCTCGATAGC GCATCTCTTC
ATGGATTTCG ACGCCAATAA GCTCGAAAGA ATATTGTTCA ACCTGCTGTC AAATGCTTCC
AAATTCACAC AGGGCGGTGG ACAGGTAAGT CTCACCATTG ATCAGCATCA TAGCCCGGCG
GGCGATTCCT GGCTGGAAAT TGCCATCACC GATACCGGGA TCGGGATTTC AGAAGACAAA
CACGAAAAAA TCTTCGAGCG CTTTTTTCAA GACGATTCAA CGCACTCTGT ACTCAATCAG
GGAAGCGGCA TCGGCCTTTC CATCGTCCGG GAATTTGTTC AGCTGCACAA GGGGTATATC
TCCGTCGAGA GCCGGCCGGG GCTGGGCAGT ACTTTTCGTG TCCAGCTGCC GATCCATGCC
GGATGCGAAG TCGTTCCCGC GCATGAGCTG CCCGAGGGAC CGGAACAGCA GCAAGGCCCG
ATATCCGCGC CGGTCGGGAG GCTGGAAAAG GTGCCTGCGG ACGAGCCTTC CAACGTGCTG
ATCATCGAAG ACAATGACGA ATTCAGACAA TATCTGAAAG AGAATCTGAT GCAGTATTAC
CGTGTAACCG AAGCCTGCAA CGGCAAGGAG GGCTGGCAGA AGACGCTTAG CCACCATCCC
GAGCTGATTG TCAGCGATGT GGCAATGCCC GAGATGGACG GCATTGCATT GAGCGAGAAA
ATCAAGGCAG ATAAGCGCAC GAAACACATT CCGATCATTC TGCTGACTGC CTCAACCGGC
GAGCAACAGC AACTCGAAGG GCTCAACTCG GGCGCCAATG ATTATCTCAC CAAACCTTTC
AACTTTGACA TTCTTAATGC AAAGATCAAC AATCTCATTC TGCTCAATAG GCTCTTGAAA
GGGGTGTATT CGCGCCATAT TAAAATTTCA GGTCAGGACC CTCAAATTCA ATCCGGTCAG
GAAAAACTGT TGAAAGATAT GCTGGACTAC ATTGAGGATA ATCTGCTTAC CTCCCAGCTT
AGCGTGGAAA ACCTGAGCAA ACACGTCGGC ATGAGCAGGG GAAGTTTATA TAGCAAAGTG
CTGGAAATGA GCGGCCAGAC CCCTATCGAA TTCATTCGTT CCATTAAACT GGAAAAAGCA
GCCGTGCTGC TCGAAAACAG CGACCTGAGC GTTTCACAAA TCTCCTACAT GACCGGTTTT
ACCGCCCCTA ATTATTTCGC CAAGTCATTT AAGGCAAAAT TCAGCATGCT CCCGACCGAG
TACCGGGCCC GCAGAAACAA ACGGCCAGTC CACAACAATG CTTTCGAGGC CGATTGA
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| Protein sequence | MSPTMRLKLI ATIIFVLFFA FLGRLTCVVM AQAPEPKFTS LTSMDGLSSN TVTAILKDRY
GLMWFATDDG LNRFDGTDVL TYRHMKNEMS SLRSSDISSL HQDRQGRMWV GTVEGGLHLY
NRRKDRFVSV SSPHSVTSIA SDASGKLWVG TTGGLVTVNP ETLQMSTFSS APEIPDQISK
GLILSVTVDH RKIVWIGTDK GLFSINPNDP TSEHINYLQS LPDEAGARSV KSVIEDHDGN
IWIGTFSGLY KLDSNGRILQ SHHYEAGNHS SLSSNMVFAI AAENGRRLWI CTDSGLNILD
VPTGKFTRYE PDTRTQFSLS NKSVRSILID DEGICWLGTY KGGVNKYDKN LPIFGLKRAD
VNDPYGLSAP FVTSFAESSS GKLFVGTDGG GVSLYNRETN LFKRFAISPK TRKAASGLAI
LSMELASETA LWIGTFQDGL FRLNPKTGAY TQFTSGKDSA SLSNNDIFVV RKDRTGKIWI
GSNGGGLHQF DPATQKFKRF YRPGVPMADR VIPLNAYIRD IIQDREGLLW IGSHGTGIAV
FDPVSQTSRL LNKQNSNLPS NIVYSILEDR QGNIWVGTSG EGLALYNPRS KRFTTFSAKE
GLASNIVNKV LEDAQGRIWV STNQGISYFD PNSRKFTNYT TYNGIQNKTF VLGSGLRTKD
NTLFFGGIDG FNYIDTRSLP STKKGAPIIL KDLRIGNHNV TSADSNFIDA DISVATAIRL
NYKQNFSIGF AALDYTNPRQ IQYRHRMKGM QSEWNHTGTN NVASYTNLSP GDYVFQVQAS
TDGVNWNGHT TSVAVVVEPP FYLTIYAYLL YILTPFVIVL IMRRRGIKKL KREFQRQQRE
AEEQQARELD KLKIKFLTNL SHEFRTPIAL ILAPIDSVLT KTRETELHAP VVAIKRNAKR
LLNLVDHLLD FKNMQQQELS LELARKDIVS FIEDTCGQFS DLFVRKGINF SVQSSIAHLF
MDFDANKLER ILFNLLSNAS KFTQGGGQVS LTIDQHHSPA GDSWLEIAIT DTGIGISEDK
HEKIFERFFQ DDSTHSVLNQ GSGIGLSIVR EFVQLHKGYI SVESRPGLGS TFRVQLPIHA
GCEVVPAHEL PEGPEQQQGP ISAPVGRLEK VPADEPSNVL IIEDNDEFRQ YLKENLMQYY
RVTEACNGKE GWQKTLSHHP ELIVSDVAMP EMDGIALSEK IKADKRTKHI PIILLTASTG
EQQQLEGLNS GANDYLTKPF NFDILNAKIN NLILLNRLLK GVYSRHIKIS GQDPQIQSGQ
EKLLKDMLDY IEDNLLTSQL SVENLSKHVG MSRGSLYSKV LEMSGQTPIE FIRSIKLEKA
AVLLENSDLS VSQISYMTGF TAPNYFAKSF KAKFSMLPTE YRARRNKRPV HNNAFEAD
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