| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0781 |
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| Symbol | |
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| ID | 8224350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 919820 |
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| End bp | 921571 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644928652 |
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| Product | TonB family protein |
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| Protein accession | YP_003085206 |
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| Protein GI | 255034585 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0709932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.241171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAC TTCCCTATCT GCTGAAAGTC AACATCTGCT GGATGGTATT TTATGGGTGC
TATTGGCTGC TTTTCCGGAA GCATACCTTC TTTATGCTCA ACCGCGCCTA TTTGCTTTTT
TCATTGATCG TCAGCTTTAT CATTCCGGCA GTTGAATTGC AGGAAACGGT CAGCGTTGTT
GAAAGTGCGG CAGCGGTGGT AACGGCAAGC GGTCCGGTGA TAGCCGCGGA CGTAACCCCC
GATACCAATT ATACGGCATA TTTACTGCTC GCCTGCTATT GTGCCGGGGC CGTTTCGATG
GCTGTTGCGC TAATTAAAGC GATCGTACAA GTGCATCGGA TCGTGCAGAG CGGGATTTCC
GTTCCCATGC AGGCTTACCG TTTGGTAATC AGTCAGCGCG AGTACGCCCG GAGCGGATCG
TTTTCGTTTT TGAAATGGAT GATCATTTCC AATGAGGACT ACGAACAAAA CTTCGAACCC
ATTTTCGCCC ATGAAATGGT GCATATCCGG CAATGGCATA CGCTCGATAT CTTGCTGATC
GAGGTCTTGA AGGTGCTGTT CTGGTTTAAT CCGGCGCTCT GGCTCTATAA GCGCGCGTTG
CAGGATACCC ATGAGTTCCT GGCCGACGAG CAGGCTGCCG ACAGGGATCA TTATGCTGCA
TTTCTGCTTA GCTATGCAAA AAGTGCCATT TCCACTTCGG TTACCAATCA ATTCTTCAAC
GCGTCCCTGC TTAAAAAGCG GATTCACATG ATCTACCGGC ACAGGACAGC CGCCTGGCTA
AGAGGCAAAT ACCTCCTGCT GCTACCCGTG CTCGCGTTGG CCGTCGTCCT GATGGCTGCC
AGAAAGTATG TTTCCGAAGA AAAGAACAGC GGAACGAGAA TTGAAAATGC CATCGTTAAC
GAAAATGGCA TTGGCTTAAT AGCTGTCAAG GGAATTGTTA CCGACGAATC AGGATTGCCC
GTGCCGAATG CTGCAATCAC CTTCTCCGGC ACTTATGAAA GCACGGTAAC TACCACCACG
GGCAGTTTCG AGATCGACAA TATCCCGCGG GGCGCAACCA TGACGGTGAC TCACGACGAT
TTCCTGGAAT ACACGCAAAA AATCCGAAAA ACGAACACCA GATACCACAT TCGCCTGAAA
AGTAATGCCA AGCCGCTTTT GACGAAAGCA GAAAGGCAAG CAGCCAAACG CATGCCTGCC
AACAGCGAAC CGGCGCGCAT TCTGCTGGAC CGCTGGCCCG GACTTCCGAA CAGGAGCAAT
TTCGTAGCCA CGACGCTAAA ATATCCGAAG CAGGCCATCC TCGACGGTGT TGAAGGGCAG
GTCTCCGTAT CATTCCTCAT TGATACCGTT GGAAATGTGA GCGATCCCAG GATCGAAAAA
GGTGTGCGGA AAGACCTGGA TAATGAAGCC CTGCGAATCG TAAGCCTCAT GCCCAAATGG
CGCCCGGCCC AGAAAAATTT CAAACCGGTG GCTGTTCGCT ACACGATGAA TGTCGCATTC
AACATCGCAG TCGACACCTT ACCGCTTGCT GTAAAGGAAA AAACGCCGGG GTTTTGGGGT
AACAGGTCCG TTTATGCCCC GGCGAAAACA GGACCGATCG GTAACCAGCT CGTCAAAGCG
GTTTTTGATC CGTCCACCAT TAATCTTCAT GACAGCACGC CCCCGAAAAC ATATTTACAT
CGTTTCGGCT TCGCAGTTGC CCCGCCGCCC GGGAAACACG TCGATATGAA AATTAAACTT
CCTAAAAAAT GA
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| Protein sequence | MEALPYLLKV NICWMVFYGC YWLLFRKHTF FMLNRAYLLF SLIVSFIIPA VELQETVSVV
ESAAAVVTAS GPVIAADVTP DTNYTAYLLL ACYCAGAVSM AVALIKAIVQ VHRIVQSGIS
VPMQAYRLVI SQREYARSGS FSFLKWMIIS NEDYEQNFEP IFAHEMVHIR QWHTLDILLI
EVLKVLFWFN PALWLYKRAL QDTHEFLADE QAADRDHYAA FLLSYAKSAI STSVTNQFFN
ASLLKKRIHM IYRHRTAAWL RGKYLLLLPV LALAVVLMAA RKYVSEEKNS GTRIENAIVN
ENGIGLIAVK GIVTDESGLP VPNAAITFSG TYESTVTTTT GSFEIDNIPR GATMTVTHDD
FLEYTQKIRK TNTRYHIRLK SNAKPLLTKA ERQAAKRMPA NSEPARILLD RWPGLPNRSN
FVATTLKYPK QAILDGVEGQ VSVSFLIDTV GNVSDPRIEK GVRKDLDNEA LRIVSLMPKW
RPAQKNFKPV AVRYTMNVAF NIAVDTLPLA VKEKTPGFWG NRSVYAPAKT GPIGNQLVKA
VFDPSTINLH DSTPPKTYLH RFGFAVAPPP GKHVDMKIKL PKK
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