Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0776 |
Symbol | |
ID | 8224345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 916637 |
End bp | 917224 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644928647 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003085201 |
Protein GI | 255034580 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.744853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.285853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTTT CCGCTTCACC GCCAGACCAC GACGAGTTAC TTGCCGGCCT GAAATCCGGG AACGAGGCGG CGTTCAGGAA GATCTATGAA AAGTTCTGGT CGCCCCTGTA CGCGGTCGCC TACAATCACC TTCGCGAGCG GATGGTGGCC GAAGAAATGG TCCAGGAGCT TTTTACCAAA CTCTGGCTGA AACGGGACCA GCTGAATATC CACACATCGC TGCAAGCTTA CCTGTACAAG GCGATCCGCC ACCTCATTTA CGATCATATC GACAAGCAGC AGGTGCGGCA GCGCGTGCAC GAGGAAATGC TCAGCCAGGG CTCGGAGGCG AGTTATATGA CCGAGGAAAC GCTCGATTTT CAGGAACTGC AAGTCAGGCT GGCCCAGGCC GTGGATCAGC TGCCGCAACC GGCGCAGGCG GTTTTTAAAA TGAGCCGGCA GGAATATTTG TCACCCAAAG AAATTGCGGG CCGCTTGAAT GTTTCTTCCA AAGCCGTAGA ATATCACCTG ACCCGCGCAT TGCGCATACT GCGGCTTCGG CTGAAAGATT TTGTTTTGTT TATTTCTCTT TGTCAAATGC TGGGGTAG
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Protein sequence | MQFSASPPDH DELLAGLKSG NEAAFRKIYE KFWSPLYAVA YNHLRERMVA EEMVQELFTK LWLKRDQLNI HTSLQAYLYK AIRHLIYDHI DKQQVRQRVH EEMLSQGSEA SYMTEETLDF QELQVRLAQA VDQLPQPAQA VFKMSRQEYL SPKEIAGRLN VSSKAVEYHL TRALRILRLR LKDFVLFISL CQMLG
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