| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0774 |
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| Symbol | |
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| ID | 8224343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 911882 |
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| End bp | 915427 |
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| Gene Length | 3546 bp |
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| Protein Length | 1181 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928645 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085199 |
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| Protein GI | 255034578 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.252982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA ACTTACTGTT TTGTAGTGGC TGGCTAATTT TTAGTGCCGG GGTGCTCACG
CATTCCTACG CACGCGCCCA GTTAGTCGCT CATGCGCACA AGTATGCTCA GGAAGCACCC
GCTCAGCCCG GCAAGCCTGC CCGGATAGCC TTGCCGCAGT TTTTCAAAAG CTTATCAAGC
CGCTATGGCG TAGCCTTTAA TTACAATTAC AGGCTGATGA GCCAGAAAAC GGTAGACGCA
TCCATCCTGG AACGTAAAAC CGAAAAGCTG GAAACGATCT TAACGGAAGC CCTCGCGCCG
CTCGACCTGA TTTTTGAGCA GTTCGAAAAC AAGTCATACA TGATTTACAG CCGCCCGGCC
CCGGCCACCC CGGCAATGCC CGAGCGGGGC CAGCCGTCGC CGGCAGGCCT GAGCGAACAA
TCGGCCGCGA ACAGGGCCGA CCGCACGGTG CGCGGCGTGG TAAAGGATGA AAAGGGCGAA
GGACTTCCCG GTGTAAGCGT GGTCGTGAAG GGCACCCAGC GCGGGACCAG CACCAATATC
GACGGAACTT ACGAACTGGC GGTTCCTGAC GGCCCGGCGA CGCTTATTTT CAGCTTTGTC
GGTTACGTAC CCCAGGAGAA GAGCATCGAA AATGAAAGCG TGGTCGAGAT CACATTGCAA
ACGGATACCA AGGCATTGGA AGAAGTGGTG GTAGTGGGTT ATGGTACGCA GAAACGTGCC
GATGTAACGG CCGCTATCTC GTCGGTACCG ATGAGCGAAC TCCGCGATAT GCCGGTATCG
AACGTGGCAA CCGCATTGCA GGGAAAGATA CCGGGCGTGG TGGTGCAGCA AAACAGCGGC
TCGCCCGGCG CGACGCCCGC GATCAAGGTA CGCGGATTCG GGTCTATCAG CGCGGGTAAC
TCACCGCTGA TCGTGATCGA CGGTAACATT GTGAATGCCA GCATTTTCGC CAACCTCAGC
CCGAACGACA TTGAAAGTAT GGACGTGCTG AAAGACGCGT CGTCGACGGC CATTTACGGT
TCCAAAGGCT CGAACGGTGT GATCCTCGTC ACCACCAAGC AAGGCAAAAG CGGCAAGCCC
AGCGTCAACC TCGATATGTT TACCGGTTTC CAGCAGGTTA GTAAAAAGCT CGACCTGATC
AACTCGCAGC AGTTCGCCGA GTTCGGAAAA GATGCCTCCA ACAATGCATA CCTCGACAAT
GTGCCCGGTG CCAACATCAG CGACCCGAAC AGCGCGCGTC CGACGGACTA CCTGCGCTAC
CGCTACCCGC GGGGCGAAGT GTTCGACTGG TTCAACTTCG ACGATCCTGC CAAGGTAGCG
GCGCTTCCTT ATACCGATTA TCAGGACGAA ATATTCCGCA CGGGCAAAAT GAGCAGCTAC
CAGCTTTCGG CCTCCGGCGG CAGCGACAAA GCCCGGTACA GCATCAGCGG CGGCTACCTT
ACGCAGGATG GTGTGATCCG GCGGTCGGCA ATGGACCGGT ACACCATGCG TGCCAACGTG
GAAGTGAATG TGCTGCCGAC ATTGAAAATA GGTTTGAATA TCAACCCTAC TTACCGCGTC
CAGCAGGAAG TGCGCGACGC GGGCCACTGG GCCGACAATG CGGTGATCAA CTCGGCGCTG
TCGGTAATGC CGATGATCCC GATTTATGCT GCGGATGGTT CGTACACGTC ACAAACCGCA
TTTGCAGCGC CTTACAACTA CCCCGGCATC ACCAACCCCG TAGCCAACAT TACCGAGTAC
AACAGCCAGT ACATTACGAC CAATCTTCTT GGAAATACTT ACGCGGAACT CAAACTTTTC
AAGGATTTCA CCTACCGCGT AACCGGGAAC GTCAATTTCA CTGGCAACCG CCGCAATGCC
TACCGCACGT CGCGAATGCC TCTGAACCAG ATTTTGCCGC CGTCCGTCTC GACAGGTACT
GCATTCTCCG ACCAGGGCCT GAGCTGGTTG TTTAACCAAA CCCTCAATTA CAGCAAGTCA
CTCCGCGATG TGCATAATTT CGACGTACTG ATCGGTATGG AATCGACCAG GTTCCAGTTC
CAGGAAAGCC AGGGAACGGG TAGCTCCTTC CCGAACGACG TGGTCGAAAC CTTGAACGGA
AGCGCGAGCG GAAGCACCAC CACGGCGGTT TCCCAGCGAC TTGAAAATGC CTCTGCGTCC
TATTTTGCCA GGGCTAACTA TAATTACAAA GGGAAATACC TCGTGAATGT GTCCGTGCGC
CGCGATGGTT CTTCCATTTT CGGGTCGGAA AACCGGTGGG GGACATTCCC GGCGGGATCG
CTCGGATGGC GGATCAGTGA AGAGAATTTT GTTAAAAGCA TTTCGGCCAT TTCGGAGGCG
AAACTGCGTG TGAGCTATGG TTTGGCAGGA AATAATGCAT TTACAAACAA CTATCCCTAT
GTAGCCACGC TGCGGTCCGA CAATTACAGC TTCAACAATA ACCTGGTGAA CGGATTGGCG
CCATCGTCGC TGGCCAACCC GCAGCTGGGC TGGGAACGCA GCCAGCAGCT AGACGCCGGT
ATCGACGTGG GATTGTTCGG CAACCGTGTA TTCCTGATCG TGGATTATTA CCGGCGCATC
ACCAAAGACC TGCTGCTATC CGTGAACGTG CCTACGCTAA CCGGCTTTGG TACAGCGGTA
AAGAATATTG GTAAAATGGA AAACAAAGGC TGGGAATTCG CATTGAACAC CCGCAACCTG
ACCAAAGCGT TCGTCTGGAA TACCAGCCTG AACCTTTCGT TGAACCGCAA TAAAGTACTG
GCACTCGGGC CCACAGGCGA CCCGATCCGC AGCGCGAGCG GCGTGGGCGA AACCAACATT
ACCCAAATCG GATCGCCGAT CGGAAGCTTC TTCGGGTTTA AACAAATCGG GGTATTCAAA
GACCAGGCCG ACGTGGATAG CCACCCGCAC GACCCGACAA CACGGCCGGG AGATGTGAAA
TACGAGGACA TCAACCGCGA CGGCAAGATC GACGCCAACG ACCGGACGAT CATCGGCAAC
AACCAGCCCG ACTTCATTTA CGGCATGACC AACACCTTCA CCTACAAGGG TTTTGACCTA
AACATAGCGA TCCAGGGCTC GCAAGGCGGT GAAATCCTGA ACCTGAGCCG CCGCTTTTTT
GAAAACCTGG AAGGAAACGC CAACCAGCTG AGCACGGTAC TGAACAGATG GCGGTCGCCC
GAAAATCCCG GCGACGGCGT AACGCCCCGC GCCAATGCAC GGACAACCGG TAACAACAAT
GCGATTTCGA CGCGCTGGGT GGAAGATGGT TCCTACCTGC GCATCCAGAA CGTAAGCCTT
GGTTACCAGT TGCCCGCCGC GTTGATCAGC AAAGCCAGGT TGCAGCAGGT GCGCATTTAT
GCTTCGGCAC AAAACCTTTT CACATTTACC AAATACCTCA ATTACAATCC CGAGGTAAGT
AACTATGAAT CGGCCGCCAT TGCCACCACC GGCACACCGC TTCCGGGACC ATTGGCCGCC
GGGGTGGATT ATGGTTCGTA TCCCTTGGCT AGAACTTTCA CGCTGGGTAT CAACATTGGA
TTCTGA
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| Protein sequence | MKKNLLFCSG WLIFSAGVLT HSYARAQLVA HAHKYAQEAP AQPGKPARIA LPQFFKSLSS
RYGVAFNYNY RLMSQKTVDA SILERKTEKL ETILTEALAP LDLIFEQFEN KSYMIYSRPA
PATPAMPERG QPSPAGLSEQ SAANRADRTV RGVVKDEKGE GLPGVSVVVK GTQRGTSTNI
DGTYELAVPD GPATLIFSFV GYVPQEKSIE NESVVEITLQ TDTKALEEVV VVGYGTQKRA
DVTAAISSVP MSELRDMPVS NVATALQGKI PGVVVQQNSG SPGATPAIKV RGFGSISAGN
SPLIVIDGNI VNASIFANLS PNDIESMDVL KDASSTAIYG SKGSNGVILV TTKQGKSGKP
SVNLDMFTGF QQVSKKLDLI NSQQFAEFGK DASNNAYLDN VPGANISDPN SARPTDYLRY
RYPRGEVFDW FNFDDPAKVA ALPYTDYQDE IFRTGKMSSY QLSASGGSDK ARYSISGGYL
TQDGVIRRSA MDRYTMRANV EVNVLPTLKI GLNINPTYRV QQEVRDAGHW ADNAVINSAL
SVMPMIPIYA ADGSYTSQTA FAAPYNYPGI TNPVANITEY NSQYITTNLL GNTYAELKLF
KDFTYRVTGN VNFTGNRRNA YRTSRMPLNQ ILPPSVSTGT AFSDQGLSWL FNQTLNYSKS
LRDVHNFDVL IGMESTRFQF QESQGTGSSF PNDVVETLNG SASGSTTTAV SQRLENASAS
YFARANYNYK GKYLVNVSVR RDGSSIFGSE NRWGTFPAGS LGWRISEENF VKSISAISEA
KLRVSYGLAG NNAFTNNYPY VATLRSDNYS FNNNLVNGLA PSSLANPQLG WERSQQLDAG
IDVGLFGNRV FLIVDYYRRI TKDLLLSVNV PTLTGFGTAV KNIGKMENKG WEFALNTRNL
TKAFVWNTSL NLSLNRNKVL ALGPTGDPIR SASGVGETNI TQIGSPIGSF FGFKQIGVFK
DQADVDSHPH DPTTRPGDVK YEDINRDGKI DANDRTIIGN NQPDFIYGMT NTFTYKGFDL
NIAIQGSQGG EILNLSRRFF ENLEGNANQL STVLNRWRSP ENPGDGVTPR ANARTTGNNN
AISTRWVEDG SYLRIQNVSL GYQLPAALIS KARLQQVRIY ASAQNLFTFT KYLNYNPEVS
NYESAAIATT GTPLPGPLAA GVDYGSYPLA RTFTLGINIG F
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