Gene Dfer_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0772 
Symbol 
ID8224341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp909567 
End bp910229 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID644928643 
Producthypothetical protein 
Protein accessionYP_003085197 
Protein GI255034576 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.252597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.28705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TCATCACAGG CACGACGGGT ATGATTGGCG AGGGCGTTTT GATTGAATGC 
CTTCAACATC CGCAGATCAC CCAGGTTTTG AGCGTCAGTC GCAAACCGTG CGGCGTGGAG
CATCCCAAGC TGACTGAATA TATCGTTCCC GACTTTTTAA CCTTGCAACC CGATGATCCC
AAACTGACGG GCTATGACGC GTGCTTCTTT TGCGCGGGCG TGAGCAGCGT CGGCATGAGT
GAGGAGCAGT ACGAGCGGCT CACGTATGAC ACGACGATCG CGTTTGCACG CGCTACCGGC
CCTTCTCCGC AAATGTCGTT TGTGTATGTG AGCGGCGGCG GCACCGATAG CAGCGAGAAG
GGCCGTATGC ATTGGGCGCG GGTGAAGGGG AAAACGGAAA ACGATCTGAT GAAAATGCCT
TTTAAGCAGG CATTTGGCTT TCGGATCGGT GTGGTGGAGC CTGCTGCGGG ACAGAAAAAG
GTGCTGCGTT ATTACAAATA TTTCTCCTGG CTTATCCCCT TACTCAAAGT GCTGCTTCCG
CGGACCGTCA GCACGATGAG GCAGGTGGCG CACGCTATGA TCAATGCTGC CCGGAACGGC
TACCCTGAAA ACGTCATTCA GGTGAAGGAT ATCGCCATTT TATCCAAACA GGATCCCATT
TAG
 
Protein sequence
MKIIITGTTG MIGEGVLIEC LQHPQITQVL SVSRKPCGVE HPKLTEYIVP DFLTLQPDDP 
KLTGYDACFF CAGVSSVGMS EEQYERLTYD TTIAFARATG PSPQMSFVYV SGGGTDSSEK
GRMHWARVKG KTENDLMKMP FKQAFGFRIG VVEPAAGQKK VLRYYKYFSW LIPLLKVLLP
RTVSTMRQVA HAMINAARNG YPENVIQVKD IAILSKQDPI