| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0752 |
|---|
| Symbol | |
|---|
| ID | 8224321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 892848 |
|---|
| End bp | 893591 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644928624 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003085178 |
|---|
| Protein GI | 255034557 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.994157 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA TGCTCATCAC CGGCGCCAGC CGCGGAATAG GCGCTGCCAT GGCCCGCCTC
GCGGCCGAAA ACGGCTTTGC AGTCATCGTC AATTACCTCC ATCATGAATG CGCGGCAGCC
CAGGTTGTGG CCGACATTGT TTCAAAAGGA GGCCAGGCGG CGGCGGTCCA GGCAGACATT
TCGCGTGAAA ACGATGTTCT GAGGCTGTTC GAAGAGGCGG ACCGGCTGTT CGGCAACCTG
CATGCGCTGG TGAACAATGC AGGTATTTTG GAACCGCAGA TGCGGCTGGA ACAAATGGAC
GCGGCGAGGC TCAACCGCAT TTTCGCAGCC AATGTCACCG GGCAGTTCCT TTGCGCCCGC
GAGGCGATCA AACGCATGTC GGTGAAGCAT GGAGGACAGG GCGGAACGAT CGTCAACGTA
TCGTCCATCG CCGCCCGCAC CGGCGCTCCC GGCGAGTACA TCGACTATGC GGCGTCCAAA
GGTGCCCTGG ACACCTTCAC GCTGGGGCTT TCCAGGGAAG TGGCCGAAGA GGGTATCCGG
GTGAATGCGG TCAGGCCGGC GTTTATTTAC ACCGATATCC ATGCATCCGG CGGCGAGCCG
GGCCGTGTGG ACCGGATCAA GGACTCCATT CCGTTGAAAC GCGGCGGTTT GGCCGCCGAA
GTGGCCGAGG CGATCCTGTG GCTGTCAACG GAAAAATCGT CCTATTCGAC GGGCATTTTT
ATTGATGTGA CGGGCGGGAA GTAG
|
|---|
| Protein sequence | MKTMLITGAS RGIGAAMARL AAENGFAVIV NYLHHECAAA QVVADIVSKG GQAAAVQADI
SRENDVLRLF EEADRLFGNL HALVNNAGIL EPQMRLEQMD AARLNRIFAA NVTGQFLCAR
EAIKRMSVKH GGQGGTIVNV SSIAARTGAP GEYIDYAASK GALDTFTLGL SREVAEEGIR
VNAVRPAFIY TDIHASGGEP GRVDRIKDSI PLKRGGLAAE VAEAILWLST EKSSYSTGIF
IDVTGGK
|
|---|
| |