Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0744 |
Symbol | |
ID | 8224313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 884840 |
End bp | 886150 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644928616 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003085170 |
Protein GI | 255034549 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.923042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTACA CGGCCGTAGC AAAAATTAAG ACAAAAATTC AAAATCCCGT AGTGCTCAAC GTTGCCTGGC TTGCCTTAGA CAAAGCGAGC AGGCTACTGA TAGGCCTGGT CGTCGGCGTG TGGGTTGCGA GATATCTGGG ACCTGCACAT TGGGGAGAGA TTAACTACAC TGCCGCGATC GTCGGCATTA TCACTACGAT TGCAAATTTG GGCATGGACG GCTTCCTCGT CAAGGAGATC GTGGCCTCGC CGGAGCAAAA GAATGAAATA TTAGGCACTG CCTTTTTTAC AAGACTGGCC TTTATCCCCG TTGGCATAGC GGCTACTTTC TGCTATTTCT ACTTTACAAA TGCGCCTGAT TATTACTACT ATTTGTTTGC ACTACTGTCT CCTAGCTTTT TAATCAGCCC GTTTGACCTC ATTGACCTGG AATTTCAGTC AAGGTTAAAA AGTAAACTCA CTGTCGTTTG CAAGAACATC GGCTATTTTA TCGGGGCTGC AATCAAGATT TATTGTTTGC TTACGCATAA ATCAGTCTTC TGGTTTGCTG CGGCCATTGG AATAGAAACC CTTTTTGCTT ACATATTTTT AATTTTTAAA TACCAGTCGG AGCAGAATAT ATTTAACTGG ATATTCAGAA AGAAAAGAGC CCGGCAGCTA TTATCCACTG GCTGGCCATT TATTGTTTCC AATCTGGCAG TCATCCTTTA CATGCGGATC GATCAGTTAA TGATCGGCAA TATTGCGGGC GAAACTGAAT TGGGATTATT CAGTTCCACT ACAAAGATTA CTGATATGTT TGTATTCATT CCGATGGCGA TCTCCGGAAG TTACCTATCA GTTCTTGTAA AAATCAAAAA AGAACAATCT GATGAGGTAT TCATTCAAAA GATATGTACT TTTTTCGGTT GGATGACCCG TATATCAATC GGTGCTGCGA TCATTATAAG CCTTCTTTCC CAACAAATAA TACAACTACT TTATGGTCCG GAATACTATC CTGCCTATTC CATTCTGGCC ATCCACATTT GGGCACTCGT TCCCATGTTT CTTGGCGTAG CATCCGGGCA GTATCTGATT ATTGAAAACC TGCAAAAGTA TAACGTCTAC AAAACGCTCA TCGGGCTAAC GCTAAATGTG CTGCTAAACG TAATACTAAT TCCAAAAATG GGCGCAGTCG GTGCAGCAAT AGCCACACTC ATATCTTATT ATGTATCGGC AATATTCTCC AATTTCCTTT TTAGGAGCAC CAAAAAACTA TTTCGATATC AGTTAAGAAG TTTTCAAATG ATATTCTCAT TTAAATCATA A
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Protein sequence | MFYTAVAKIK TKIQNPVVLN VAWLALDKAS RLLIGLVVGV WVARYLGPAH WGEINYTAAI VGIITTIANL GMDGFLVKEI VASPEQKNEI LGTAFFTRLA FIPVGIAATF CYFYFTNAPD YYYYLFALLS PSFLISPFDL IDLEFQSRLK SKLTVVCKNI GYFIGAAIKI YCLLTHKSVF WFAAAIGIET LFAYIFLIFK YQSEQNIFNW IFRKKRARQL LSTGWPFIVS NLAVILYMRI DQLMIGNIAG ETELGLFSST TKITDMFVFI PMAISGSYLS VLVKIKKEQS DEVFIQKICT FFGWMTRISI GAAIIISLLS QQIIQLLYGP EYYPAYSILA IHIWALVPMF LGVASGQYLI IENLQKYNVY KTLIGLTLNV LLNVILIPKM GAVGAAIATL ISYYVSAIFS NFLFRSTKKL FRYQLRSFQM IFSFKS
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