Gene Dfer_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0744 
Symbol 
ID8224313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp884840 
End bp886150 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content41% 
IMG OID644928616 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_003085170 
Protein GI255034549 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.923042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTACA CGGCCGTAGC AAAAATTAAG ACAAAAATTC AAAATCCCGT AGTGCTCAAC 
GTTGCCTGGC TTGCCTTAGA CAAAGCGAGC AGGCTACTGA TAGGCCTGGT CGTCGGCGTG
TGGGTTGCGA GATATCTGGG ACCTGCACAT TGGGGAGAGA TTAACTACAC TGCCGCGATC
GTCGGCATTA TCACTACGAT TGCAAATTTG GGCATGGACG GCTTCCTCGT CAAGGAGATC
GTGGCCTCGC CGGAGCAAAA GAATGAAATA TTAGGCACTG CCTTTTTTAC AAGACTGGCC
TTTATCCCCG TTGGCATAGC GGCTACTTTC TGCTATTTCT ACTTTACAAA TGCGCCTGAT
TATTACTACT ATTTGTTTGC ACTACTGTCT CCTAGCTTTT TAATCAGCCC GTTTGACCTC
ATTGACCTGG AATTTCAGTC AAGGTTAAAA AGTAAACTCA CTGTCGTTTG CAAGAACATC
GGCTATTTTA TCGGGGCTGC AATCAAGATT TATTGTTTGC TTACGCATAA ATCAGTCTTC
TGGTTTGCTG CGGCCATTGG AATAGAAACC CTTTTTGCTT ACATATTTTT AATTTTTAAA
TACCAGTCGG AGCAGAATAT ATTTAACTGG ATATTCAGAA AGAAAAGAGC CCGGCAGCTA
TTATCCACTG GCTGGCCATT TATTGTTTCC AATCTGGCAG TCATCCTTTA CATGCGGATC
GATCAGTTAA TGATCGGCAA TATTGCGGGC GAAACTGAAT TGGGATTATT CAGTTCCACT
ACAAAGATTA CTGATATGTT TGTATTCATT CCGATGGCGA TCTCCGGAAG TTACCTATCA
GTTCTTGTAA AAATCAAAAA AGAACAATCT GATGAGGTAT TCATTCAAAA GATATGTACT
TTTTTCGGTT GGATGACCCG TATATCAATC GGTGCTGCGA TCATTATAAG CCTTCTTTCC
CAACAAATAA TACAACTACT TTATGGTCCG GAATACTATC CTGCCTATTC CATTCTGGCC
ATCCACATTT GGGCACTCGT TCCCATGTTT CTTGGCGTAG CATCCGGGCA GTATCTGATT
ATTGAAAACC TGCAAAAGTA TAACGTCTAC AAAACGCTCA TCGGGCTAAC GCTAAATGTG
CTGCTAAACG TAATACTAAT TCCAAAAATG GGCGCAGTCG GTGCAGCAAT AGCCACACTC
ATATCTTATT ATGTATCGGC AATATTCTCC AATTTCCTTT TTAGGAGCAC CAAAAAACTA
TTTCGATATC AGTTAAGAAG TTTTCAAATG ATATTCTCAT TTAAATCATA A
 
Protein sequence
MFYTAVAKIK TKIQNPVVLN VAWLALDKAS RLLIGLVVGV WVARYLGPAH WGEINYTAAI 
VGIITTIANL GMDGFLVKEI VASPEQKNEI LGTAFFTRLA FIPVGIAATF CYFYFTNAPD
YYYYLFALLS PSFLISPFDL IDLEFQSRLK SKLTVVCKNI GYFIGAAIKI YCLLTHKSVF
WFAAAIGIET LFAYIFLIFK YQSEQNIFNW IFRKKRARQL LSTGWPFIVS NLAVILYMRI
DQLMIGNIAG ETELGLFSST TKITDMFVFI PMAISGSYLS VLVKIKKEQS DEVFIQKICT
FFGWMTRISI GAAIIISLLS QQIIQLLYGP EYYPAYSILA IHIWALVPMF LGVASGQYLI
IENLQKYNVY KTLIGLTLNV LLNVILIPKM GAVGAAIATL ISYYVSAIFS NFLFRSTKKL
FRYQLRSFQM IFSFKS