Gene Dfer_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0734 
Symbol 
ID8224303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp876549 
End bp877595 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID644928606 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_003085160 
Protein GI255034539 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCG TTTCTTCTTT CAAACTACCC AAAGAGCTCT GGGCACAAGG CCTTTTCTGG 
CTATGTTTCT TCCTCTTCGA GTGGCTCAAT ACCGGCGCAT ACCTCGACAA TTTCCAGCAG
GGCCTCTGCC AGATCAGCGT GCAAATCCCG CTGCTGATCG TGGCCGGGTA CTGGCATTTA
CTGGTTACCG TGCGCCGTTT CCTCCTACAC GGCCGCATGG CGGCGTTCTG GACTTCGCTG
GTGGGAGGTT TGTTTGTCTT CGGTGTGCTG CGCAGGGCCA TCAGTTACCA CTGGATTTAC
CCGGTATACT ATCCGGATGC CTTGGAAAAG CCCTTCTGGT ATGCGCCCAA AATCCTGGCC
GAGGCCATGC AGCTGCATCT GGTCGTCGGG CTGTTTGTGG TGGTAGATCT CGTCCGCCAC
GCGCTGCGCC AGCAGCAGCT GAGCGAAACC TACCGGCGCG AGAAGGTTTC AGCCGAATAC
CAGTTGCTGC AATCCCAGGT ACAGCCGCAT TTTTTGTTCA ATACATTAAA TAACCTCACG
TCCGTCTCCA TTCAGCAGCC CGACAAAATG CCCAACCTCT TGCAGCGGCT TGCGGGGTTA
CTTAGCTATC AACTGCATGA AAGTCACCGG GATAAGGTAC CGCTATCGAA AGAAATCGCT
TATCTCAAAG ATTACATTTC CCTCGAACAG CTCCGCTACG GCGACCGGCT CGATATGCAG
ATGAATTTCA ATGCCCTGCC GGGCACAACG CACATTGTGG TGCCGCCGAT GCTCCTGCTG
CCGTTTGTCG AAAATGCGTT CAAACATGGC GCGGCGCAAA CGGAAGGGCC TTGCTGGATA
CAGATCAACC TTTCGATCAA CGATAACCGG CTGATTTTTT CCGTTGAAAA TTCGGTGCAG
AATGACGCGC CGGTGCCGTT TCAGTCGGGG CTCGGGCTTA CCAACCTGAA AAAGCGACTG
AAAATCCTTT TTGCAGACAG CTACGAGCTG GTAACGATGC CCGAAGAAGG GCAGTTTTTA
GCAGTATTAA AATTCAATAT CAACTGA
 
Protein sequence
MIRVSSFKLP KELWAQGLFW LCFFLFEWLN TGAYLDNFQQ GLCQISVQIP LLIVAGYWHL 
LVTVRRFLLH GRMAAFWTSL VGGLFVFGVL RRAISYHWIY PVYYPDALEK PFWYAPKILA
EAMQLHLVVG LFVVVDLVRH ALRQQQLSET YRREKVSAEY QLLQSQVQPH FLFNTLNNLT
SVSIQQPDKM PNLLQRLAGL LSYQLHESHR DKVPLSKEIA YLKDYISLEQ LRYGDRLDMQ
MNFNALPGTT HIVVPPMLLL PFVENAFKHG AAQTEGPCWI QINLSINDNR LIFSVENSVQ
NDAPVPFQSG LGLTNLKKRL KILFADSYEL VTMPEEGQFL AVLKFNIN