| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0716 |
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| Symbol | |
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| ID | 8224285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 845609 |
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| End bp | 846190 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928589 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003085143 |
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| Protein GI | 255034522 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.892025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.487343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAATT ATCAGGGATG TACCGACTCA GCGTTGCTGG CGCTCATCGC CGAGGGTGAC
GAGCTGGCAT TTGCGGAAGT GTACCGCCGC TACAAAGGCG TTCTGTTCCT GCATGCGCGG
CGCATTCTCG GCAATGATGA AGAAGGAAAA GACGTTTTGC AGGAGCTTTT CACCACGCTC
TGGACCCGGC GGACTTCCAT TGATCTCAAA ACGAACCTCT GCGCCTACCT GTACGCCTCC
GTGCGCAACC GGGTATTCGA TATCATCGCG CACCGCAAAG TGGAGGCCAG ATACATCGCC
TCATTGGCCG CATTCATCGA ACAAGGCGAG TACGTAACCG ACCAGCAGGT GCAGGAGAAG
GAGCTGCGGG AGCTGATCGA GCAGGAAATT GCATTGCTCC CCCCGAAAAT GCGGGAAGTA
TTTGAGCTGA GCCGCAAGGA AGAATTATCC TACAAAGAGA TCGCCGATCA GCTGCATATT
TCGGACAAAA CCGTTAAAAA ACAGGTCAAT AATGCGCTCC ACATTCTTCG GGAGAAGCTC
GATACCGTGT TCACTTCAAT GGCCTGCTTC CTCTTTTTTT AA
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| Protein sequence | MDNYQGCTDS ALLALIAEGD ELAFAEVYRR YKGVLFLHAR RILGNDEEGK DVLQELFTTL
WTRRTSIDLK TNLCAYLYAS VRNRVFDIIA HRKVEARYIA SLAAFIEQGE YVTDQQVQEK
ELRELIEQEI ALLPPKMREV FELSRKEELS YKEIADQLHI SDKTVKKQVN NALHILREKL
DTVFTSMACF LFF
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