| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0714 |
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| Symbol | |
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| ID | 8224283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 840726 |
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| End bp | 844100 |
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| Gene Length | 3375 bp |
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| Protein Length | 1124 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928587 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085141 |
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| Protein GI | 255034520 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.232472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.99116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTATT TCCGTAAAAT ATTATTGGTG ATGAAATTGA CGGCCTTAAT ACTTACGATG
GTATGCCTTC ATGTATCAGC AGCCAGCTTT TCGCAGAAAG TCAGCATGGC GGTACGGAAC
AAACCGCTGG CGGCCGTGTT CGCCGACATT CAACAGCAAA CGGGCTACCA GTTCTTTTAC
GACAACAAAG TCGTGAAAAA AGGCAACAAG GTGACAGTCG ACATCCGCTC GGGGTCGATT
GTGGAAGTGA TGGATGCCGT GATGAAAGGC CAGCCGCTCA CTTACAGCAT TATCGACAAA
ACGGTCGTCA TCAAACGGAA GCCCGAAACA GGCCGTGATA CCCGGCCGGA AAGCAATGCA
GGGAATGCAG AAATGAAAGC TGTACTTCCG GCCAGTCAAC CCGAAAAACG GCTGGAAACG
CTGCTGCTAC GCGGCCCGGC CGAATACCAG AAAGCCGACC TGGGCATCAC CGGCAAGGTG
ACCGACGACA AGGGCGAAGG CCTGCCCGGC GTGAGCGTGA TCCTGAAAGG CACCCAGCGC
GGCACCACGT CCGATGTGGA TGGGTCGTTC CGGATAGACG TGCCGGACAA GGGTTCGGTG
CTCATATTCA GCTTTGTAGG CTATGTATCT AAAGAAGTGA CCGTCGGCCC GGAAGCGACG
CTCACGGTAA CGCTCCAGAC CGATAACCGG AGCCTGGAAG AGGTCGTAGT GGTGGGCTAC
GGCACCGTCA AAAAGAGCGA CCTGACGGGC TCGCTGTCGC AGGTGAAAGC AAAGGAGCTG
AACGCCTACC CGGCCACCAA CGTGTTGCAG GCACTTTCGG GACGTGCCGC AGGCGTGCAG
GTATTGCAAA ACAACGGCTC GCCGGGAAGC GGTGTGAGCG TGCGCATCCG GGGGACCAAT
TCGGTGAACG GGGGCAATGA GCCGCTGTAT GTGGTGGATG GCTTCCCGAT CAACGGCAGC
AACCCCACGA TCCTGAACAA TGCGGATATT GAAAGTATGG AAATACTGAA AGACGCGTCG
GCCACGGCCA TTTACGGCTC GCGCGGCGCC AACGGCGTGG TGCTCATCAC AACCAAACAA
GGCAAGGCAG GCAAAACCCG CGTCGATTTC GAGACCAGTT ACAGCATTCA AAAGCTGCGC
AAAAGGTTGG ACATGATGAA TGCGACCGAA TACGCAACCT TTTACAACGA GCAAGCCGCG
AACGACAAGC TGAACCCCTA TTTCACGCAG GCGCAGATCG ACGCGATGGG CGCAGGCTAC
GATTGGCAGG ACCTGATTTT CCGCACGGCC GCCATGAAAT CGACAGCGCT CAGTGTGAGC
GGGGGAAACG ATAAAACCAA CTTTTCCTTG TCGGGAAGCA CCTTCAACCA GGATGGGATC
ATCAAAGGAA GCGATTACAA CCGGTACTCC ATCCGCGCGA ATATCAACCA TACGATCAGC
AAGATGTTCA GCGTCAACTT CTCGGGAACG CTGAGCCGGC TCGTTACGGC GCGCAAGGAC
AGCGAAGGCG GCGGCCGCGG CACATCCATG ATCTCCTCGG CCATCGGCGC GCCGCCGTCG
CTCACGCCCT ACAATGAAGA CGGCATTTAC AGAATCCTCG CCACCGCCTA CCCGTTCGTG
GCCACGGACC TGATCAACCC GATCAACTTC ATTAACGAAC AAAATGAGAA GACCAGGGCC
AACGTGGCGC TCCTGAATGC TGCCCTGGTC TTCAAGCCCA TCGAGGACAT TACTATTAAA
ATCGCCGGTG GATTGGAGAA CCGCGACGAC CGGACGGATA GATATACGAC TACCCGGTTT
GTCCGGTCCA ATGGCTCTGC TTCGGTGAAT ACCGGCCAGT TTACGAGCTT TCTGAGTGAA
AACACCGTGA GCTATAACAA GACGATTGCC GACAAGCACA GCGTTTCGGC CGTAGCCGGG
TTCACCTACC AGGACTTCAC CTCCACCGCG CTGTCGGCCA GCGGCGTGGG CTTTTTGAGC
AATACCACCG AAACCTACGA CCTCAGATCC GCGGCCACGC CCGGCATTCC GACCTCGGAT
TATTCCAAAT CCGTGCTCCT CTCCTACCTG GCGAGGCTGA ACTACGCATT CGACAGCAAA
TACCTGGCGA CCGTCAGCTT GCGGCGCGAC GGTTCCTCCA AATACAGCGA GGGTGATAAA
TGGGGCTACT TCCCGTCGGC CGCGCTCGCC TGGCGGGTTT CCAATGAGGA TTTTCTCAAA
AACAACACGG TTATCTCCGA TCTGAAAGCC CGCGCAAGCT GGGGGCTGAC CGGCAGCCAG
GCAATCAGCG CGTACGCCAC GCTGAACCAG CTCGATGCCG GAAAAACCAC ATTCGGCGAC
GCGCTGTACA GCACCTACAC GCCCGGGACG AAACTGCCGG GCAACCTGAA ATGGGAAACG
ACCGAACAAA AGGATTTTGG GATTGACCTC GGTTTATTCA AAAACAGGCT CATTGTTGCG
GTCGATTATT ATGTCAAAAA CACGAGGGAC CTGCTCAACA CCGTCACGCT GCCCGCTTCA
CTCGGGTACA CCACGACAAT CCGTAACATC GGAGAAGTAC AAAACAAGGG ATTCGAACTC
GGGCTGGATG GCCGCATTCT CACGGGTGCA TTCAAGTGGG ATTTGAATGC GAATATTTCG
CTGAACCGCA ACAAGGTTTT GAAACTCAAT GACGGACAGG ATATCCTCGG CGGCACGGTG
AACGTGGTGG TGATCAACGA CGTGACCAAC ATCCTGCGCG AAGGAAGGCC CATCGGACAG
TTTTGGGGCT ACATGGAAGA CGGGTACGAC GAGAAGGGAA AAATCAGGTA CCAGGATACC
GACGGCGACG GAAGTATTAC CATCAAGGAC AAAACCTACA TCGGCAATCC TAACCCGGAT
TTCATTTACG GCATCAACTC CAATATGTCC TACAAGAACT TCGACCTGAC GTTTTTTATC
CAGGGCGTGA GTGGCAATGA TATGTTCAAT GCAAGCGGCA TGAGCAGCAC CATCGACTAC
GGATTTGGCC TGAATATGCC GAAAGAGGTT TACCAGAACC ACTGGACGCC TTCCAACACC
AACGCCAAAT ATCCGCTGAT CAGCAACAGC GTGAATGCGC GGGTATCCAA CCGCTACATC
GAGGACGGCT CCTACCTGCG CCTGAAAAAC ATCCAGCTGG CCTACAACTT CCCCCTGCAA
AAATGGGGCG TCAAATGGAT CAGTCATGCG CAGCTGTACG CAAGTGCGCA AAACATCCTC
ACACTCACCA AATACTCCTG GTGGGACCCC GAAGTGAACT CGCGCGGAGG CAGTAACTCC
ATCCAGCAGG GCATCGACTT TTACAGCTAC CCGATCGCCA AGTCAGTCAC ATTCGGTTTG
CGGGTCGGTT TTTAA
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| Protein sequence | MRYFRKILLV MKLTALILTM VCLHVSAASF SQKVSMAVRN KPLAAVFADI QQQTGYQFFY
DNKVVKKGNK VTVDIRSGSI VEVMDAVMKG QPLTYSIIDK TVVIKRKPET GRDTRPESNA
GNAEMKAVLP ASQPEKRLET LLLRGPAEYQ KADLGITGKV TDDKGEGLPG VSVILKGTQR
GTTSDVDGSF RIDVPDKGSV LIFSFVGYVS KEVTVGPEAT LTVTLQTDNR SLEEVVVVGY
GTVKKSDLTG SLSQVKAKEL NAYPATNVLQ ALSGRAAGVQ VLQNNGSPGS GVSVRIRGTN
SVNGGNEPLY VVDGFPINGS NPTILNNADI ESMEILKDAS ATAIYGSRGA NGVVLITTKQ
GKAGKTRVDF ETSYSIQKLR KRLDMMNATE YATFYNEQAA NDKLNPYFTQ AQIDAMGAGY
DWQDLIFRTA AMKSTALSVS GGNDKTNFSL SGSTFNQDGI IKGSDYNRYS IRANINHTIS
KMFSVNFSGT LSRLVTARKD SEGGGRGTSM ISSAIGAPPS LTPYNEDGIY RILATAYPFV
ATDLINPINF INEQNEKTRA NVALLNAALV FKPIEDITIK IAGGLENRDD RTDRYTTTRF
VRSNGSASVN TGQFTSFLSE NTVSYNKTIA DKHSVSAVAG FTYQDFTSTA LSASGVGFLS
NTTETYDLRS AATPGIPTSD YSKSVLLSYL ARLNYAFDSK YLATVSLRRD GSSKYSEGDK
WGYFPSAALA WRVSNEDFLK NNTVISDLKA RASWGLTGSQ AISAYATLNQ LDAGKTTFGD
ALYSTYTPGT KLPGNLKWET TEQKDFGIDL GLFKNRLIVA VDYYVKNTRD LLNTVTLPAS
LGYTTTIRNI GEVQNKGFEL GLDGRILTGA FKWDLNANIS LNRNKVLKLN DGQDILGGTV
NVVVINDVTN ILREGRPIGQ FWGYMEDGYD EKGKIRYQDT DGDGSITIKD KTYIGNPNPD
FIYGINSNMS YKNFDLTFFI QGVSGNDMFN ASGMSSTIDY GFGLNMPKEV YQNHWTPSNT
NAKYPLISNS VNARVSNRYI EDGSYLRLKN IQLAYNFPLQ KWGVKWISHA QLYASAQNIL
TLTKYSWWDP EVNSRGGSNS IQQGIDFYSY PIAKSVTFGL RVGF
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