Gene Dfer_0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0698 
Symbol 
ID8224267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp824128 
End bp825084 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID644928571 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003085125 
Protein GI255034504 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[S] Function unknown 
COG ID[COG2846] Regulator of cell morphogenesis and NO signaling
[COG4309] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03652] iron-sulfur cluster repair di-iron protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.249196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA TACCGACTAT AAATGTTACC ACTATTGAAC CGCGATTCAA ACACGCCACG 
ATTTTTCAGC ATTTCGATGC GCTGCTGCCC GGCGGTTCAT TCATCATCTT TAACGACCAC
GACCCGAAAC CGCTGTACTA CCAGCTGCTG GGCGAGCGCG GCGATATTTT TACCTGGAAA
TATTTGCAGG AAGGTCCGGA ATACTGGCAG GTGAAAATCT CGAAAAAGGG CGCCGAAGCG
GATAATGAGA CTGTGGGGCA GCTGGCCTCG CAGGACATCC GCAAGGCCGA CGCATTCCGC
AAGCTCGGCA TCGATTTCTG CTGTGGCGGA AAGCGGAAAC TCAAAGACGC CCTGCGCGAA
GCAGGCGTGA CGCAGGAGCA ATATGAGGAA ACCCTCGCCG CCGCAGCCAC GCTGCCCGTT
TCGCAGCAGC CGTTGAACTT CGCTGCCTGG CAGCCCGGCT TTCTGATCGA CTATATAATG
AATGTGCATC ACCAATATGT GCGCGACACC GGGCCGGTGA TCGGAGGCCT TGCCGTGAAA
GTGGCCAGCC GCCACGGCGA CAAGCACCCC GAGTTGTTTG CACTCTCAGA GCAGGTGCAG
CTGCTGCTTT CTGATCTGTA CAATCATCTG GAAAAAGAAG AGGGCATTGT ATTCCCTGCT
ATCAAACAAT TCGCCCAGGC CAGCGACAAG GCGCAAATGC AGGACACCCC GGACCTGAAT
GTGGTGATCG GGCTGATGGA AGCCGAGCAC GCCTCCGCTG GCGACGACCT GAAAAGGCTC
AGAAAGATCA GCAACGAATA CCAGCTGCCC CAGGGTGCCT GCAATTCGTA CACCTATTTG
TTCGAAAAGC TGAAAGAGTT TGAAAACGAC CTTTTCAACC ATATTCACCT GGAAAACAAC
ATCCTGTTCC CAAAAGCATT GAAAATCAGC CGCCAGCTGG CCGGTGAGGC AGCGTAG
 
Protein sequence
METIPTINVT TIEPRFKHAT IFQHFDALLP GGSFIIFNDH DPKPLYYQLL GERGDIFTWK 
YLQEGPEYWQ VKISKKGAEA DNETVGQLAS QDIRKADAFR KLGIDFCCGG KRKLKDALRE
AGVTQEQYEE TLAAAATLPV SQQPLNFAAW QPGFLIDYIM NVHHQYVRDT GPVIGGLAVK
VASRHGDKHP ELFALSEQVQ LLLSDLYNHL EKEEGIVFPA IKQFAQASDK AQMQDTPDLN
VVIGLMEAEH ASAGDDLKRL RKISNEYQLP QGACNSYTYL FEKLKEFEND LFNHIHLENN
ILFPKALKIS RQLAGEAA