| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0685 |
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| Symbol | |
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| ID | 8224254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 808452 |
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| End bp | 809027 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928558 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003085112 |
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| Protein GI | 255034491 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.429521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAACC CTCCAACCAT CCGAACCGAT TTGCCGGAGC CGCCTTCGGA AATCATCAAT
GAAGTAGACG TCGAATGGCT TTACAAGCAG CACGGGCCGT TTTTGTTACG CATTTGCTTT
TCGTTTTGTA AGGATGAAAG CCTGGCTGCG GATATGGTCC AGGAGATTTT TTGCGCGATC
TGGGATCGCA GGATGACGCT CTCCGTAACC GGGCCCTGGG AAAACTACCT CTATCGCTGC
GCCAAATTCC AGTTTTATAA CCACCAGCGG AGCCTCACGC GGTTCAGGTC GGTGCAGGAC
GACGTGGCCG CCCGCGCCGA GCCTTGGGAC GACAGCACCC GCCAGTACAT TGAATACGCC
GATCTGAAAC AGAATGTCAA CGAGCTGGTG GAACAGCTGC CCGACCAATG CCGCAAAGTT
TACCGAATGA GCCGCCAGCA GGGGCTTAAT GCCGCGGAGA TTTCAAAAGA GCTGCTGCTT
TCCGAAAAAA CCGTCAAAAA CCACCTCACC CGCGCGCTGG GCTTTCTCCG GCGTAACCTC
GAAGGACTTT TTGCGCTGGC ACTCCTCGCC GGATAA
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| Protein sequence | MTNPPTIRTD LPEPPSEIIN EVDVEWLYKQ HGPFLLRICF SFCKDESLAA DMVQEIFCAI
WDRRMTLSVT GPWENYLYRC AKFQFYNHQR SLTRFRSVQD DVAARAEPWD DSTRQYIEYA
DLKQNVNELV EQLPDQCRKV YRMSRQQGLN AAEISKELLL SEKTVKNHLT RALGFLRRNL
EGLFALALLA G
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