Gene Dfer_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0667 
Symbol 
ID8224236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp784716 
End bp788474 
Gene Length3759 bp 
Protein Length1252 aa 
Translation table11 
GC content54% 
IMG OID644928540 
Producthypothetical protein 
Protein accessionYP_003085094 
Protein GI255034473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA ACTGCGAAAA CATAACCAAT CCGTTGGGTT TAAAAAGAGA AGGCACCGAC 
CAGAACAGCC GGTTCCTGAC TTCGCTTAAA CCTGAATCCG CGCCGGTGGA TGCGAAAACC
GTGGCCGACG ACCTGGTTTT CACGCAGCAA CTTGCCCGGC TTGTGAAGTT TTTCGGGGTT
GGCGACGCGC ATTTTGGGGA TGACAACTGG CAGCCGTTTT TCAGTCAGGA TGTGTCAGTG
ATGCTGGCTT TGGCGGCGGT GCAGGATATG AGTGAATACA ATGCGCTTAT CCATCAGAAA
CTCGGAAGCA TTCGCCAAAA CACGGATAGC GAGGCGGTTT TGAAACAAAA CTTCGGCACA
CTGCTCAACC TCGTAACCAG CGTGGCCTGG CAGATCGAGC ATTTGCAGCA CTCGCTTCCC
GACGATATTC TGCTCAAAGG TTCGATCCGC AACCTGATCA GGAGCAAGCT GGCTGTGCCA
TTCCAAAAGC TGTTTGCATA CCATCAGGCG GCGGTTGCCA ACGGCCTCAC CGACGAAACG
GAAGCGACCG GCCTCACCTT ATTCGGCACA CCGGTGCAAA TGGCGACCAC TGTTTTTAAC
CGATCCTTCG GCCCGCTATG GACGGACGGT GTGCAGAACT GGAACGTTTT CAAGCTCACC
ATCGCCGCGG ACGATTCCAT TTACAACCTG CCAGCAGCGA CCACCACCGC CAGACGTTTA
TACTTTGCCG TAACCCATAA CTTTTTCACG GCCATTTTCG ACCAGTTTCT CCGCGCATTT
TCCAAAATCA CCACCGACGC CAACGTTCAG TTACAACAAA CGCTCACCCA GCGCAACGAC
CATCAGCCGC ATACCGCCCT TTTTATTTCA TTCCTGAAAT TGCTGGAATT TGCACGAAAA
GATGCGAACA CGCTTACAAA ACGCCATCTG GACCTTTACT ATAAAGAAAT TTTACAGATC
CCTGAGCGCA AACCCAGACC GAACCAGGTG CATGTGATCT TCGAAGCGGC GCGGTTTGTG
GAAGGTGCTT TAATCAAAAA GGGCACGCTG CTGAATGCCG GAAAAGATTC GCTCGGGAAC
GATGTGGCGT ATGAGATCGA TCAGGATACG GTGATCAACA AGGCCAAAAT CACGGCCCTG
CATTCGGTGT ACATCGGCAC GGCGCAGGAC GAGGTGCTGG ATATAAATCC TTACATACTG
GAAGGGCGCG TGTATGCGTC GCCGGTGGCT AACTCGGATG ATGGGTTGGG GGCCGAATTA
ACCTCCGGTG AAAAGCAATG GCATCCATTT GCGTCCAAAA AATACGTGAA TGGCGTTCTC
GAAGACATTA CCATGCCCAA AGCAGAGATC GGGCTGGCCG TCGCTTCGCA TTACCTTTAC
CTGAAAGAGG GCGAAAGAAG CATTGTTGTC GAAATCACCA CGGGCAATGC GCTGCCCAAC
CCGGCCAATC GCTGGGAGGC GGAGGTCACA ACCGCCGAAG GCTGGCAAAA GCTTGCTATC
ACGGCCAGTT TTACTTCCAA TGTGCTCATT TTCAGAAACG ATGCCATTCC CGCGGACTTC
CCGGCCATTA CCGCCTACGA TCCGGCAGTG CACGGGCGGA GCTTCCAGGC CACCGCGCCG
GTGATCCGGT TCAGGTTGAA GCATTCTTTG CAAGCATTTC CTTACAAGGC ATTCAAGGAT
GCGATTGTGC AGAAAGTGAG GCTCACCGTC GGGTCGAAGC AAGTGAAGGA TATTTTTGTA
CAAAACCCTT TCGGCATTCT CGATCCTTCC AAACCATTCC TGCCGTTTGG CCCGCTGCCG
GAGAAGGATG CCTATTTCAT CATCGGTTCG GGCGAGATTT TTCAGAAAAA GGGCGCACAG
GTTTCCACGA AACTGGCCTG GCAGAATGTC CCTGCGACGG TAAGCCCCAA CCCTCCGGCA
AAGATCCAGA AACTGCAACT GGGTGTATGG CAGGACATTG GCACCGAAGC GAACCTGCTC
GACGGGATTG CCAACGTGGT GACCGTCGAC GCAGCCGACG TGTCGAAGCC GGATGCCGGC
GGCAACAACA TGTACGATGT CAACAGCACT AACGGCTTCT ACCGGTTCCG GCTCGACGGC
AGTTTCGGAC ACACCGCTTA CCAGGCGGCA TTAACCAACT ACCTCATCGA CAAAGCGAAA
GAAAACAGCG ATTCCAACGC GATCAAAACG GTGATTGCGG CCTATGAACT GCCCGCATCG
ACACCCACCG CCGAAAGTGC GATCACGATG ATCAAAGGCA TCGTGTATGC ATCGCCCGTA
GCCCCTACCC CGCCCTACAC GCCCGTGATC GACGAAATAT CCCTGAGCTA CACGGCCAGC
ACGGAGATCG CCCTGATCGA CAGCAGCAGT TTCACGAACC GGTCTTTGCA GTTTTTCCAT
GCGTATCCGT TCGGCGACGT GGAGCAGCAC CGGGCACTGA AAGACCCGCT GACCGACCAT
GAAACCGACG TGCGCCTTTT GCCCTATTTC AGGCATTACA ACAATGGCGA TGTCTATTTC
GAGATCGAGG GACAAAGCGG CTTTGTAGCG CATGAGGGCG AATTTTACAT GGGATTGAGC
GAGGCCGTTC CCGGACAGAA AGTGGCCGTT TTGTTCCAAT TGGATGAAGG CAGAGCCAAT
CCGAGAATCA AAAAGCCGGA CAATCATGTG CATTGGAGCT ATTTGGCCGA TAATCGCTGG
ATTTCATTTC AAAAACTGGA AGTACAGGAC AGCACCTCGC AGCTAACGCG CTCGGGGATC
ATCACATTTA CCATTCCCAA ATCCGCCGGC ACAGACAACA CCATGCTCCC GAAAGGCCAG
GTATGGCTTC GCGCGAGCGT GTATGAGGCG AGCGAGGCCG TGTGCAAGAT CATCGCCGTG
CTGCCGCAAG CTGCCTCGGC TACTTTCAAA GACCAAACCA ATGCGGGCGA TTTCCTGGCG
GCACCGCTTC CGGCGGGCAC CGTTGCGAAG CTCCTTGAAC CCGAGGCCAG CATTAAAAAG
ATTGAACAAC CCTATGCATC ATTCGGTGGG CGGACGCGTG AAAATGCCCC GGATTACTAC
AAAAGAGTGA GCGAACGGCT GCGGCACAAG GACCGGGCGA TTACCGTATG GGATTATGAA
CATCTGATTT TGGAAGAGTT TTCGAACATT TACAAGGTAA GGGTGATCAA TCACACCCGG
TACGAACCTA ACGACTCGGG CACCGGGATA TACAACGAGC TGGCCGCAGG CCACGTGACC
ATCGTACCGA TCCCCGACCT CCGCACCCGC AATGCGATCG ACCCGCTGAA ACCCTACACC
AATGTGGCCG ACCTGGAATC GATTGAGGCC TTCATCAGCA AACGCAAATC CTGTTTTGCG
AAAATCCATG TTCAAAACCC GGTTTTTGAA GAAGTGAAGG TGCAATGCAA TGTCAAATTC
TACCCGCAGT ATGACGAAGC TTTTTACACC ACACAGCTCA AACAGGAGAT TACCCGTTTT
CTTTCTCCCT GGGCGTTCGG CAATGCCGCC GAGATTCGTT TCGGCGGGCA AATCAGCAAG
TCCGTGCTGA TCAATTTTAT CGAAGAGCGC GCCTATGTGG ATTACCTGAC CGATTTTGTT
CTATATCACA AAATCGGTAA TACACTGACA GACAAGGAGG AAATCACCGC ATCCAGGGCC
ATCGCGATCC TGGTGTCGGT GCCTGCCGAG CAGCACATTA TCGTCCCGAT CCCGCACGTG
CCGGAAACTG CCGCCGCAGA AAATTGCGGT TGCGATTAG
 
Protein sequence
MMSNCENITN PLGLKREGTD QNSRFLTSLK PESAPVDAKT VADDLVFTQQ LARLVKFFGV 
GDAHFGDDNW QPFFSQDVSV MLALAAVQDM SEYNALIHQK LGSIRQNTDS EAVLKQNFGT
LLNLVTSVAW QIEHLQHSLP DDILLKGSIR NLIRSKLAVP FQKLFAYHQA AVANGLTDET
EATGLTLFGT PVQMATTVFN RSFGPLWTDG VQNWNVFKLT IAADDSIYNL PAATTTARRL
YFAVTHNFFT AIFDQFLRAF SKITTDANVQ LQQTLTQRND HQPHTALFIS FLKLLEFARK
DANTLTKRHL DLYYKEILQI PERKPRPNQV HVIFEAARFV EGALIKKGTL LNAGKDSLGN
DVAYEIDQDT VINKAKITAL HSVYIGTAQD EVLDINPYIL EGRVYASPVA NSDDGLGAEL
TSGEKQWHPF ASKKYVNGVL EDITMPKAEI GLAVASHYLY LKEGERSIVV EITTGNALPN
PANRWEAEVT TAEGWQKLAI TASFTSNVLI FRNDAIPADF PAITAYDPAV HGRSFQATAP
VIRFRLKHSL QAFPYKAFKD AIVQKVRLTV GSKQVKDIFV QNPFGILDPS KPFLPFGPLP
EKDAYFIIGS GEIFQKKGAQ VSTKLAWQNV PATVSPNPPA KIQKLQLGVW QDIGTEANLL
DGIANVVTVD AADVSKPDAG GNNMYDVNST NGFYRFRLDG SFGHTAYQAA LTNYLIDKAK
ENSDSNAIKT VIAAYELPAS TPTAESAITM IKGIVYASPV APTPPYTPVI DEISLSYTAS
TEIALIDSSS FTNRSLQFFH AYPFGDVEQH RALKDPLTDH ETDVRLLPYF RHYNNGDVYF
EIEGQSGFVA HEGEFYMGLS EAVPGQKVAV LFQLDEGRAN PRIKKPDNHV HWSYLADNRW
ISFQKLEVQD STSQLTRSGI ITFTIPKSAG TDNTMLPKGQ VWLRASVYEA SEAVCKIIAV
LPQAASATFK DQTNAGDFLA APLPAGTVAK LLEPEASIKK IEQPYASFGG RTRENAPDYY
KRVSERLRHK DRAITVWDYE HLILEEFSNI YKVRVINHTR YEPNDSGTGI YNELAAGHVT
IVPIPDLRTR NAIDPLKPYT NVADLESIEA FISKRKSCFA KIHVQNPVFE EVKVQCNVKF
YPQYDEAFYT TQLKQEITRF LSPWAFGNAA EIRFGGQISK SVLINFIEER AYVDYLTDFV
LYHKIGNTLT DKEEITASRA IAILVSVPAE QHIIVPIPHV PETAAAENCG CD