| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0662 |
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| Symbol | |
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| ID | 8224231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 771882 |
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| End bp | 772874 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644928535 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003085089 |
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| Protein GI | 255034468 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0114263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATC ACGAAATTGA TTTAAGCCAA AGCCTGAACA ATGAAGGCGT TATCCTTTTT
TTAAACGGGC AAATAGAAGA AGCAATTGCC AAATATCGGC AGGCCATTGC CGCGGAGCCC
GACAATGCGT CTGCCCACAA TAACCTGGGT TTTGCATTGG CGCAACAAGG CGATTTCGAA
CAGGCTTCGG AACACTATCG CTTATCGCTC GAACTCGACC CGGAAAATGA TAATACATGG
CTTAATCTGG GAAATTTAAA AATGATGTCC GGCGATTATT CCGGGGCCAG GGATTTATTT
GAAAATGCAT TAAATATCAC CCGTGACATT GCAAATGTTT GGGAAAGTTA TGCCAAACTG
ATGACAATTT CCGACGACCC TTCTGCGGCT GTAAATGCCT GGCAGCAAGC GTTGCGCATT
CATCCGCACT CCCCGGATTA CCATCTCGAA TTGGGAATTG CACTCATCGC CGATGGCAAA
CATTCGCAGG CGATTTATCA TTTGCAGGAA GTTTTGTATC AGGATCAGGA AAATATACGG
GCTAACCTGA GCCTCGGTAT CGTCCATCTA ATTCAGCAGA ATTATGGTTT GTCGCAGCAA
TTTCTCAAAA AGGTTTTAGG AATTGAGCCG GAAAACTCAT CGGCGCGGTA CCATTTGGCC
ATGAACTATT TATCGACCCA TAACGAACCG CTGGCGATCC AGGAATTGGA AAGGATTCTG
ATCATGTATC CCAATGACCT CACCACGATG TCGGACCTCG CGGTGGTTTA CCTCGCCACC
GACCAGGCCG GGCGGGCCAG GGCGCTCATT GACAAATGCC TCAAATTAAA CCCCGAACAC
CCCAAAGCCG CCTATTACAA CGCATTGATC GATCATATCG AAAAGCGCTT TCAGGAATCG
CACCGGAAGC TGAGCAACCT GGTTACGCAA AACCCGCCGG TTTACGGAGC AAAAGCAAAG
CAATACCTGG ATACGTATTT TTCAACTTTT TAA
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| Protein sequence | MENHEIDLSQ SLNNEGVILF LNGQIEEAIA KYRQAIAAEP DNASAHNNLG FALAQQGDFE
QASEHYRLSL ELDPENDNTW LNLGNLKMMS GDYSGARDLF ENALNITRDI ANVWESYAKL
MTISDDPSAA VNAWQQALRI HPHSPDYHLE LGIALIADGK HSQAIYHLQE VLYQDQENIR
ANLSLGIVHL IQQNYGLSQQ FLKKVLGIEP ENSSARYHLA MNYLSTHNEP LAIQELERIL
IMYPNDLTTM SDLAVVYLAT DQAGRARALI DKCLKLNPEH PKAAYYNALI DHIEKRFQES
HRKLSNLVTQ NPPVYGAKAK QYLDTYFSTF
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