| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0658 |
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| Symbol | |
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| ID | 8224227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 766972 |
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| End bp | 769353 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928531 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003085085 |
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| Protein GI | 255034464 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.442095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.737711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGAA ATTACCTTCA AATCGCGTGG CGTAACCTTA CCAAGAATAC CGTTTTTTCG
GCCATTAATC TGATTGGCCT TTCCATGGGG ATGGCTACTG CCATTTTGCT TGGGTTATGG
TTATGGGATG AGTTGTCTTT TAACCGGTAC CACCAGCACT ACGGCCGGCT CGCGCGCGTG
ATGCAGCATC AGACCGCGAA CGGGCAAACG TTCACCAGCA CCGCCACCCC GCTTCCGCTG
CGGAATGCAT TGGCGCATGA TTTTGGGGGT GATTTCAGTC ACATCGCATT GTCTTCGTGG
ACCGAAGACC ATATCCTGGC CTACGGCGGC AACCAGTTCA CCAGAAAGGG AAATTGTGTG
GAGGCGCATT TCCCGGCGAT GATGTCGCTG AAAATGCTCC GCGGGACGTC CAAAACCCTG
GACGACCCGA CGTCCGTTAT ACTTTCGGAA TCGGTGGCGC GGGCGCTGTT CGGGGGCGCG
GAGCCGATCA ATAAGGTGAT AAAGGTGGAC AATAAGCACC ATTTCAAGGT CACCGGGGTG
TACGAAGACC TGCCTTACAG CACGGAGTTC CGTGACGTTT CATTTATGCT GCCATGGAAT
TTTTTCCTGG AAACCACCCC GTGGGTCAAG CGGTCGGAAA CGAACTGGGG TAATAATTCC
TTCCAACTAT TCGCAGAAAT CGCCCCTGGC GCCACTTTCG AAGGGCTTTC TGCCAAAATA
GAAAACATCA AAGCGCGCCA CGCGCCGGAT GAGGCACGGC TCGATCCGAG GATCTTTTTG
CACCCTATGA GCCGCTGGCA CCTGCATTCG GAATGGGAAA ATGGCGTGGC CGTTCGGGGG
CGTATCCAGT TTGTATGGCT TTTTGGCATG ATAGGCGCAT TTGTGCTGCT GCTCGCTTGC
ATTAACTTCA TGAACCTCTC CACGGCCCGT TCGGAGCGGA GGGCGAAGGA AGTGGGCGTG
CGGAAGGCGG TCGGTTCGGG GCGCCGGCAG CTCATTGCCC AGTTTCTTCT GGAATCGGTA
TTAATGGCGG TGCTGGCGTG CATTTCGGCG CTGGTGCTGG CGAATCTGCT GCTGCCGGTC
TTTAACAACA TTGCCGACAA GCGCATTGCA TTCCCGTGGT CGAGCGGTGT GAGCTGGGCG
GTGGCGCTGG GTTTTACCTT GCTCACAGGA CTTCTGGCAG GCAGCTATCC GGCATTGTTT
TTGTCGAAAT TCAATCCCGT AAAAGTACTC AAAGGAGCAG TCTATGGCGG AAAAGCGGCT
GTTTTGCCGC GGCAAATACT GGTGGTGACG CAGTTCACTA TTTCGATCAC TTTCATCATC
GGCACGCTGG TAGTGCTCCG GCAAATACAG CACGCCAAAG ACCGGCCAAC GGGTTTCCAG
CGCGCAGGCC TTGTTTCGAT TCCCCTCAAC ACCCACGAGC TTCGGAATAA TTATGATGTG
CTCAGGGAAG AATTGCTGCA AACAGGTGCC GTGTCCGACA TTTCGGAAAC ATCTTCGCCC
GTGGATGAGG TGTGGAGCAA CGATGCAAGT TTCAGCTGGC CGGGTAAGGA CCCGAATCTC
GTAGGCGACT TTGGAACCGT CGGGATCACG CACGAATATG GGAAAACGGT AGGCTGGCGC
TTCACGCAGG GGCGCGACTT TTCCCGCCGC TTTGCCACCG ATTCCCTCGC GATCGTACTC
AATGAAAGCG CTGCCGAATT TATAGGCATT AAAAAGCCCG TGGGTATGAA TATCCAGTGG
AATGGTGAGC ATTACACTGT CGTAGGCGTG ATCGCCGATG TGATCGCAGG ATCGCCGTTT
ACGCCGGCGC GGCCAACGGT GTACGTGCTC AGGCAGGATT GGGCGGATTT TATTTACATA
AAACTCAGCC CCGAAAAAAA TCCCGGACAG ATACTTTCCG CGATCGAACC CATTTTCCGG
AAACACAGCC CCGGCAGCCC GTTTGAATAC AAGTTCGCCG ATGACGAGTA CGACCGCAAG
TTCCGGGCCG AAGAGCGGAT CGGGCAGCTC GCGGGGATAT TCACGACGCT GGCGATCCTG
ATCAGTTGCC TTGGCCTGTT CGGTTTGGTG TCTTTTCTGG CGGAGCAGCG GCGCAAGGAA
ATCGGTATCC GCAAAGTGCT CGGCGCGTCG GTGGCGAGCG TTTGGGCACT GCTTTCAAGG
GATTTTGTCG TTCTGGTCGT GGTCGCTTCC TTGCTCGCGG TGCCTGTTTC CTACTATGTT
TTAAGTGGCT GGCTCGAAAA TTACGCTTAT CGAACGGAGC TGTCGTGGTG GATTTTCGCT
TTGGGTATCG TAAGTGCCCT TGTGATAACG CTCTGTACAG TGGGATTCCA GGCGATCAAG
GTCGCATTAC TGAATCCCGT TAAAACTTTA CGCAGCGAAT AG
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| Protein sequence | MIRNYLQIAW RNLTKNTVFS AINLIGLSMG MATAILLGLW LWDELSFNRY HQHYGRLARV
MQHQTANGQT FTSTATPLPL RNALAHDFGG DFSHIALSSW TEDHILAYGG NQFTRKGNCV
EAHFPAMMSL KMLRGTSKTL DDPTSVILSE SVARALFGGA EPINKVIKVD NKHHFKVTGV
YEDLPYSTEF RDVSFMLPWN FFLETTPWVK RSETNWGNNS FQLFAEIAPG ATFEGLSAKI
ENIKARHAPD EARLDPRIFL HPMSRWHLHS EWENGVAVRG RIQFVWLFGM IGAFVLLLAC
INFMNLSTAR SERRAKEVGV RKAVGSGRRQ LIAQFLLESV LMAVLACISA LVLANLLLPV
FNNIADKRIA FPWSSGVSWA VALGFTLLTG LLAGSYPALF LSKFNPVKVL KGAVYGGKAA
VLPRQILVVT QFTISITFII GTLVVLRQIQ HAKDRPTGFQ RAGLVSIPLN THELRNNYDV
LREELLQTGA VSDISETSSP VDEVWSNDAS FSWPGKDPNL VGDFGTVGIT HEYGKTVGWR
FTQGRDFSRR FATDSLAIVL NESAAEFIGI KKPVGMNIQW NGEHYTVVGV IADVIAGSPF
TPARPTVYVL RQDWADFIYI KLSPEKNPGQ ILSAIEPIFR KHSPGSPFEY KFADDEYDRK
FRAEERIGQL AGIFTTLAIL ISCLGLFGLV SFLAEQRRKE IGIRKVLGAS VASVWALLSR
DFVVLVVVAS LLAVPVSYYV LSGWLENYAY RTELSWWIFA LGIVSALVIT LCTVGFQAIK
VALLNPVKTL RSE
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