| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0647 |
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| Symbol | |
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| ID | 8224216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 751249 |
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| End bp | 753417 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928521 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_003085075 |
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| Protein GI | 255034454 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.539207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.291924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAC ATATTGAAAA CCAGATCGAA AACCCTGCCG AGCAGCCTGA CCTGAAAGCA
CTTCCCGGCA GACCTTACCC GCTCGGCGCA CAATGGGACG GCGAGGGCAT CAACTTTGCC
GTTTTTTCGG AGAATGCACA GGGGATCGAA CTCTGCCTGT TCAGCGAAGA AGGTGAAGAG
TATGCCAAAG TAAAAATTGA AGAAGTTACC CACCACGTGT GGCACGTGTA CATCCCCGGG
CTCAAACCCG GCCAACTGTA CGGCTACCGC GTGTATGGCC CGTACGAGCC CGGCAACGGC
CACCGGTTCA ATCCCGCAAA GCTGCTGGTA GACCCTTATG CGAAGGCATT GAGCGGTAAT
CTCGACTGGG ACGATTCGCT TTTCGCCTAC CGCGTGGGCG ACCCGGAGGA GGACCTCAGC
TTTGATGAAC GCGACAGCGC GCCGTTCATG CCCAAGTCGG TGGTCGTGGA TGAGGCTTTC
GATTGGGAAG GTGACCAGCG CCTCGACCGT CCTTACCACC AGACGATCAT CTATGAAGCG
CATGTCAAGG GTTTTTCCCA ACTGAATAAC CAGATCCCCG AAGAACTCCG CGGCACTTAT
GCCGGCCTGG CCCACCCCGC TTCCATCGAA TACCTGAAAA ACCTGGGCAT TACGGCAATC
GAACTATTGC CGGTGCATCA TTTTGTGGCC GACCGGCACC TGGTAGAAAA GGGATTGACT
AATTACTGGG GCTACAACAC GCTCGGTTTC TTCGCGCCCG ACCCGCGCTA TTGCCATTGC
AACGAGCCCG GGGAGCAGGT CAGCGAGTTT AAACAAATGG TGAAGGAACT GCACAAGGCG
GGCATCGAGG TGATTTTGGA TGTAGTGTAC AACCACACCG CCGAAGGCAA TCACATGGGC
CCTACCCTGT CTTTCAAAGG ATTCGACAAT GCGTCCTACT ACCGGCTGAC CGAAGAGGAC
AAGCGCTACT ACATGGACTA CACAGGCACT GGTAACACAT TGAATGTGAG GCTTCCGAAC
GTGCTCGCAT TGATCATGGA CAGCCTCCGC TACTGGATCA CGCAAATGCA CGTCGACGGC
TTCCGTTTCG ACCTGGCAGC AGCCCTCGCC CGGACGCTCC ACGACACCGA CAACCTGAGT
TCGTTCTTCA ATATCATCCA CCAGGACCCG GTGATTTCGC AGGTGAAACT CATTGCCGAG
CCGTGGGATA TCAATGAAGA TGGCTATATG GTGGGCAAGT TCCCCGTCGG CTGGGGCGAA
TGGAATGGGC TGTACCGTGA CGAGATGCGG GATTTCTGGC GCGGGGAGCA AATTAAAATG
ACGGCATTTG CCCAACGACT CACCGGCAGC CCCGACTTGT ACCACAACAG CTACCGCCGC
CCGACGGCCA GCATTAACTT CATCACCGCC CACGACGGCT TCACGCTCCG CGACCTGGTG
AGCTACAACG AAAAACACAA CGAGGCCAAT GGCGAGGACA ATGCGGACGG CGACGATTCC
AACCGCTCGT GGAACTGCGG CGCGGAAGGC CCGACGGACG ACCCGGGCAT TAACGAACTG
CGGGCGCGGC AGCAACGCAA CTTCCTGGTA AGCCTGTTTT TATCGCAGGG TGTGGCCATG
ATCGTGGCTG GCGACGAATG GGGCCGCACA CAGCAGGGCA ACAACAATGC CTATTGTCAG
GATAATGAAA TCTCGTGGCT GGATTGGGAA AATACCGACC AGGAGCAACT AGATTTTACC
CGCAAACTGA TCCATTTCTG TCACGATCAC CCTTCTTTCC AACGGCGGCG CTGGTTTCAG
GATATGCCGG TCCAGGGCTC GGGTATCCGC GACATCATGT GGTTCATGCC CGACGGCAAT
GTGATCCCCG ACGAAAACTG GGGCGAAGCC AATGCGGGCG CGTTCGGGGT GTTCTTTAAT
GGCCTGGGAA TCCGCTGCGT GAACATGGAC GGCCAGCGCC TTGTGGACGA CCACTTTTAC
ATCATTTTCA ATCCATCCGA AAATGCAGTA ACATTCAAAC TGCCGGCGGA AGAATGCGCT
GCGGGCTGGC GCGTGGTGAT CGATACGAAC GAAGGGCTGG TGGGCGAAAA GACCGATCAC
CTGCCCGCAT TGGCAGAGAT CGAAGTTCGC GACCGGTCGG TGCTGGTGCT GAGGTGCCCG
CATTCATAA
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| Protein sequence | MDQHIENQIE NPAEQPDLKA LPGRPYPLGA QWDGEGINFA VFSENAQGIE LCLFSEEGEE
YAKVKIEEVT HHVWHVYIPG LKPGQLYGYR VYGPYEPGNG HRFNPAKLLV DPYAKALSGN
LDWDDSLFAY RVGDPEEDLS FDERDSAPFM PKSVVVDEAF DWEGDQRLDR PYHQTIIYEA
HVKGFSQLNN QIPEELRGTY AGLAHPASIE YLKNLGITAI ELLPVHHFVA DRHLVEKGLT
NYWGYNTLGF FAPDPRYCHC NEPGEQVSEF KQMVKELHKA GIEVILDVVY NHTAEGNHMG
PTLSFKGFDN ASYYRLTEED KRYYMDYTGT GNTLNVRLPN VLALIMDSLR YWITQMHVDG
FRFDLAAALA RTLHDTDNLS SFFNIIHQDP VISQVKLIAE PWDINEDGYM VGKFPVGWGE
WNGLYRDEMR DFWRGEQIKM TAFAQRLTGS PDLYHNSYRR PTASINFITA HDGFTLRDLV
SYNEKHNEAN GEDNADGDDS NRSWNCGAEG PTDDPGINEL RARQQRNFLV SLFLSQGVAM
IVAGDEWGRT QQGNNNAYCQ DNEISWLDWE NTDQEQLDFT RKLIHFCHDH PSFQRRRWFQ
DMPVQGSGIR DIMWFMPDGN VIPDENWGEA NAGAFGVFFN GLGIRCVNMD GQRLVDDHFY
IIFNPSENAV TFKLPAEECA AGWRVVIDTN EGLVGEKTDH LPALAEIEVR DRSVLVLRCP
HS
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