Gene Dfer_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0646 
Symbol 
ID8224215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp750117 
End bp751067 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content58% 
IMG OID644928520 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003085074 
Protein GI255034453 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.821476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.141742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CAGATTACCG CGCCGGCCAT TCCCCCGCAT TACGCGCTTC GGGGCCGGTG 
TTGTGCCTTT TGCTGGCCTG CGTGGCGTTT TCCTGCCGTG TGAGCGTGCC GAAGGAGCAT
GACGGAAGTG CCGCATATGC CCATCTGCTG GCGCACGGCG GCGATTCGGC CACGATAGCC
GGGCGGCTTA TCGGGCTGGA AGAAACCGTC AATTTCAGGG ATTTGGGCGG GTTGCAAACG
AAGGATGGCA AAACCGTCCG CCAGGGAATG ATCTACCGGT CCGACAATTT GGCCAAACTG
AAAACCAGCG AGTACGGCCG GTTCAGCAAC CTGCGCATTA CTACCGTGTT CGATTTGCGC
ACCGATCATG AAATCGAAGG CAAGGAAGAC CAGCTTCCGG AGGGTGTCCG CTACCTGCAC
ACGCCCGTGG TGGAAGACAA TGCCGGACAA ATCGCCGGGC TGAAAAAGCG CGTGCTCAAC
GGTCAGATAA CCGAGCAGCA GGCCATCGAC ATGACCGCCG GATTCTACGC CGATGCCGTA
ACCGCGCACG CCGCCGCAGT AAAGGATATC CTGAACCAGA TACTCCGTTC CGAACAGCCC
GTGCTGTACC ATTGCTCCGC AGGCAAAGAC CGGACAGGCA TCATTTCGGC CATTATACTT
TCCGTTCTCA ATGTGGACAG GCAGCTGATC GTCGACGACT ACATGCTTTC CAATTACTAT
CGCCGCGACC GGGCCGAAAA AACGCTCGGC AAGGCCAAAC TCGGCCGCGT GATCAAGCCC
AAACTGAATA GGGAAGCCAT TGAAGTGCTT ACCACCGTCG ACGAACGCTT CATCAACGCC
ACATTCGACG CGATCGACAA GACCTACGGC GGCATGGAGC CCTTCATCGC CAACCAACTC
GGCATCGACC CCGCGACCAG GAAAGCGCTG ATCGCCAGGC TGACGCAATA G
 
Protein sequence
MKNTDYRAGH SPALRASGPV LCLLLACVAF SCRVSVPKEH DGSAAYAHLL AHGGDSATIA 
GRLIGLEETV NFRDLGGLQT KDGKTVRQGM IYRSDNLAKL KTSEYGRFSN LRITTVFDLR
TDHEIEGKED QLPEGVRYLH TPVVEDNAGQ IAGLKKRVLN GQITEQQAID MTAGFYADAV
TAHAAAVKDI LNQILRSEQP VLYHCSAGKD RTGIISAIIL SVLNVDRQLI VDDYMLSNYY
RRDRAEKTLG KAKLGRVIKP KLNREAIEVL TTVDERFINA TFDAIDKTYG GMEPFIANQL
GIDPATRKAL IARLTQ