Gene Dfer_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0644 
Symbol 
ID8224213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp745981 
End bp748593 
Gene Length2613 bp 
Protein Length870 aa 
Translation table11 
GC content59% 
IMG OID644928518 
Productphosphoenolpyruvate synthase 
Protein accessionYP_003085072 
Protein GI255034451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0824821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA CAGCAGCGGA CAACGCAGTA GTGACTTTGG CAACGATCGA CCGCACACAG 
CAGGCGCTGG CGGGCGGTAA AGGCGCAAAC CTCGCAGCGC TCGCACGGAT CGACGGGATT
CGTGTCCCGG ATGGTTTCTG CATCACCACT CCGGCATTCG ACCGGATCGT GCAGCAGGCG
TCCATTGCCG CGCTGCTCGA CGAACTGGCC AAGCTCGGAA CGGGCGACGG TGCAGCCATT
GCGCGCGTCA GTGCCGAAAT CCGCGCCTGC ATTGAAGCGA CGGCCGTGCC CGCCGACATT
TACGAGGCAA TCGCCAGCCA TGTACGGGCG CTGGGCGCGG GAGACGCCTG GGCAGTGCGG
TCGAGTGCCA CGGCGGAAGA TTTGCCCGGG GCTTCGTTCG CGGGTCAGCA GGATAGTTAT
CTGAATGTCA GCGGTGTAAA CTCCATTGTA AAACACGTAA GCAAATGCTG GGCATCGCTG
TTTACGGAAC GGGCGGTGAC TTACAGGATC AGGAATGGCT TCGATCACCG GGCGGTGAGC
CTCGCGGTGG TGGTACAGAA GATGGTTTTC CCGGAAGCGT CGGGCATTCT CTTTACCGCC
GATCCCGTGA CATCGCACCG CAAGGTAATT TCCATTGATG CCGGATTTGG TCTGGGCGAA
GCGCTGGTAT CGGGATTGGT GAATGCGGAC CATTACCAGG TGCGCGGCGG GGAGGTGATT
GATAAGAAAA TAGGTTCTAA AAATCTGGCT GTATATACCG CAGCCACCGG CGGCACCGAG
CACTGCGATG TCCCGCCCGG CCAGCAGGAG CAACAGGTGC TGACCGACGG GCAAATCCTG
GAACTGGAAC AGATCGGCCG TAGCATTGAG GCCCATTTCG GGCAACCGCA GGATATTGAA
TGGTGCTTGT CGGGAAATGA ATTTTACATT GTCCAAAGCC GGCCGATCAC CACGCTGTTT
CCCGTTCCGG CGGTTGCTGA TGCCGACAAC CATATATATG TATCGGTAGG GCATCAGCAA
ATGATGACCG ACGCCATGCG GCCGCTGGGG CTGTCGGTAT GGCTGCTGAG TGCCGCCCGG
CGCATGGAAA CCGCCGGCGG CAGGCTGTTT GTGGACGTTA CGCAGGATAT TGCGTCGCCC
GCCGGGAGGA ATTTGCTGAT CAATGTCCTC GGTAAATCCG ACCCGCTGGT GAGGGATGCG
ATGACGACCA TCCTGGAACG GGAAGAATTT GCTTCAAAAT ATAATCCCGA AACCTCACCG
GCCGGGGATG GCAAGCCGCA TTGGGATTAC CAGGCGATTC AAGACTTTGA TTCCGCGGTG
GTGGCTGAGC TCATTCACCG CGCCGAAGCG TCGATAGCGG AACTGAAACG CGATATTGAC
GCATTGTCGG GCACGGAACT GATCGATTTC ATTCTTGCGG ACCTTGAAAA GGCCAAAGCG
AGGGTGTCCG ACCCGCAGAG TTTTCAGGTG ATCATGACGG GTTTCAATGC CGCATCGTGG
ATTAACGAAC AGATGGCCGC CTGGCTGGGG GAGAAGAATG TCGCCGACGC GCTATCACAG
TCGGTGCCGC ACAATGTTAC TTCCGAAATG GGCCTGGCGC TGCTCGACGT GGCCGACGTG
ATCCGCCCAT TCCCGGAGGT AATCGAATAC CTGCAAAAGA ACGCCGGCGA CGATTTTTTG
GAAAAAATGG CCACACTGAA CGGCGGCACT CAGGCGCGCG AAGCGATCCA GCAGTTCCTC
GACCGGTACG GAATGCGGTG CGCCGGAGAA ATTGATATAA CTCAAACACG CTGGGCGGAA
AAGCCCGCGA TCCTGATCCC GATGATCCTC GGTAATATCA AAAACCAGGA ACCCGGCGCA
GGCAAGCGGA AATTTGAGCA GGGCATGGAG CAGGCGAAGC GGAAAGAGGA AGAGCTGCTC
GGCCGGCTGC GGCAACTGCC GGAGGGCGGG CAAAAGGTTG CCGAAACGAA GCGGATGATC
GACCTGCTGC GCAACCTGGC GGGCTACCGG GAATATCCGA AATACAACAT GGTGAGCCGG
TATTTCGTGT ACAAGCAGGC TTTGCTGCGG GAAGCGCAGC GGCTGGTGCA GGAACGGGTA
ATTGACCATG AAGAGGACAT TTATTTCCTG GATTTTCACG AGATCCGGAA TGTAATAGCC
TCAAATAGAG TGGATTTTGG TCAGATTGCG GCGCGGAAGG ATGCCTATGA GCTGTATCGC
AAGCTGAGCC CGCCGCGCGT GATGACGTCC GAAGGCGAGA TCATTACCGC GAAATACAAT
CGGAATAACC TCCCTGCGGA TGCGCTCGCG GGCTTGCCTG TGTCTGCCGG CGTGGTGGAG
GGGCGTGCGC GGGTGATCCT GAACCTGGAA GATGCGGACC TGGAAGAGGG CGATATACTG
GTCACCAAAT TCACCGACCC GAGCTGGACA CCCCTGTTCG TGGCCGTGAA AGGCCTGGTT
ACCGAAGTGG GCGGCCTCAT GACCCACGGG GCCGTGATCG CCCGCGAATA TGGCCTGCCG
GCAGTGGTAA GCGTCGAAAA CGCCACCCGG CTGATCGCCG ACGGGCAGCG AATCCGCGTG
CACGGGACCG ATGGCTACGT GGAATTTTGC TAG
 
Protein sequence
MKTTAADNAV VTLATIDRTQ QALAGGKGAN LAALARIDGI RVPDGFCITT PAFDRIVQQA 
SIAALLDELA KLGTGDGAAI ARVSAEIRAC IEATAVPADI YEAIASHVRA LGAGDAWAVR
SSATAEDLPG ASFAGQQDSY LNVSGVNSIV KHVSKCWASL FTERAVTYRI RNGFDHRAVS
LAVVVQKMVF PEASGILFTA DPVTSHRKVI SIDAGFGLGE ALVSGLVNAD HYQVRGGEVI
DKKIGSKNLA VYTAATGGTE HCDVPPGQQE QQVLTDGQIL ELEQIGRSIE AHFGQPQDIE
WCLSGNEFYI VQSRPITTLF PVPAVADADN HIYVSVGHQQ MMTDAMRPLG LSVWLLSAAR
RMETAGGRLF VDVTQDIASP AGRNLLINVL GKSDPLVRDA MTTILEREEF ASKYNPETSP
AGDGKPHWDY QAIQDFDSAV VAELIHRAEA SIAELKRDID ALSGTELIDF ILADLEKAKA
RVSDPQSFQV IMTGFNAASW INEQMAAWLG EKNVADALSQ SVPHNVTSEM GLALLDVADV
IRPFPEVIEY LQKNAGDDFL EKMATLNGGT QAREAIQQFL DRYGMRCAGE IDITQTRWAE
KPAILIPMIL GNIKNQEPGA GKRKFEQGME QAKRKEEELL GRLRQLPEGG QKVAETKRMI
DLLRNLAGYR EYPKYNMVSR YFVYKQALLR EAQRLVQERV IDHEEDIYFL DFHEIRNVIA
SNRVDFGQIA ARKDAYELYR KLSPPRVMTS EGEIITAKYN RNNLPADALA GLPVSAGVVE
GRARVILNLE DADLEEGDIL VTKFTDPSWT PLFVAVKGLV TEVGGLMTHG AVIAREYGLP
AVVSVENATR LIADGQRIRV HGTDGYVEFC