Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0637 |
Symbol | |
ID | 8224206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 735793 |
End bp | 737394 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644928511 |
Product | hypothetical protein |
Protein accession | YP_003085065 |
Protein GI | 255034444 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.488669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGTAA CCAGACTAGC CTGCATTCTT TTTGGAATAA TACTACTCCC CGGTACCGAG GGCCGGGCCC AGCATGCCGT GCTGCAACCC GACCGTTTCA AGTCTTACAT TTCCGCATTC AACGATTCGG ATGAGGAGAT TTATAAACAA CTCATTCCCA ATTCGAAAGC CTGGGAGTTT TTGGCTGCAA ACATACCGCT GTTCGAATGT CCCGACAAGC AACTCGAACA AACCTACTAC TTCCGCTGGT GGACCTACCG GAAACACCTC AAACAGACGC CGGCGGGGTA CATTGTTACT GAATTCCTGC CGGATGTTCC CTGGGCGGGC AAATACAACT CGATCAACTG TCCGGCTGGC CATCATTTTT ACGAAGGTCG CTGGCTGCGG GATACCACTT TTTTGAAACA ATACGCTCGG TTCTGGTTCC GGGGCGGCGC GAGTCCGCGG GCTTATTCAT CGTGGGCGGC CGACGCCATC CGCGCATACA CGCTCGTGCA CCCCGACAAC GCGTTCCTTA CCGATCTCCT GCCCGACCTC GTCGCCGACT TCCGCGAATG GGAGAAAACC CACCTCGACT CGACCGGCCT GTTCTGGCAA ACCGACAACC GCGACGGAAT GGAAATATCC GTATCCGGCG CCTACGGCCG GAAAGACGAG GGTTACCGCG CCACGATCAA CAGTTATATG TTCGGGAATG CAAAGGCCAT TGCCGACATT GCCGGACTGG CCGGGAACAC CGGCATGGCC ACGGAGTTCA GCCGCCGTGC CGCGACGATC AAAAGCCGGA TCATCAGCAG GCTGTGGGAC GACAAGGCCC GGTTTTTCAA GGTAATCCCC CGGGGCCTGC CTTCCCTCCA ACGCGCCGAT GTGCGCGAAC TGCATGGCTT CACGCCATGG TATTTTTCAA TTCCCGACAC GAGGCACGCC GCTGCATGGG GGCAGCTGCA CCATCCGCAG GGCTTCCTGG CGCCCTATGG TCCTACCACC ACCGAGCAGC GGCACCCGGG CTTTCGCATT GCCTACGAAG GCCACGAATG CCAGTGGAAC GGCCCCAGCT GGCCGTTTTC AACCACCATT ACCTTAACCG CCCTTGCCAA CCTGCTCAAT AATTATGAGC AATATGCGAT GACAAAAAAT GATTTTTGGA AGCTGCTCAC CACATACAGC CGCTCGCACC AGCGCATCCG CGAGGACGGA AAACTCGTCC CCTGGATCGA TGAAAACCTG AACCCCTACA CCGGCGACTG GATTTCCCGC ACCCGACTGG CCACGATGGA AAACGGCACG TGGTCGAAAG CCAAGGGCGG CCGCGAGCGC GGTAAGGACT ACAACCATTC GGCATTTGCC GACCACGTGA TTTCAGGGCT CGTGGGCATA CGGCCCGAAG CTGGCAACCG GCTCGTGATC AACCCATTAC TGCCTGATAA CACCTGGGAT TACTTCTGCC TCGACGGCGT GCGTTACCAC GGCAGGAACA TTACCGTGGT GTACGACAAA ACGGGCCGGA AATACGGCAA GGGCGCCGGG CTCCGCATTC TCGTGGACGG CACGGAAAAG GCGTCCGCGC CCGGTTTAAG CAAAATCACC ATCACCATTT AA
|
Protein sequence | MMVTRLACIL FGIILLPGTE GRAQHAVLQP DRFKSYISAF NDSDEEIYKQ LIPNSKAWEF LAANIPLFEC PDKQLEQTYY FRWWTYRKHL KQTPAGYIVT EFLPDVPWAG KYNSINCPAG HHFYEGRWLR DTTFLKQYAR FWFRGGASPR AYSSWAADAI RAYTLVHPDN AFLTDLLPDL VADFREWEKT HLDSTGLFWQ TDNRDGMEIS VSGAYGRKDE GYRATINSYM FGNAKAIADI AGLAGNTGMA TEFSRRAATI KSRIISRLWD DKARFFKVIP RGLPSLQRAD VRELHGFTPW YFSIPDTRHA AAWGQLHHPQ GFLAPYGPTT TEQRHPGFRI AYEGHECQWN GPSWPFSTTI TLTALANLLN NYEQYAMTKN DFWKLLTTYS RSHQRIREDG KLVPWIDENL NPYTGDWISR TRLATMENGT WSKAKGGRER GKDYNHSAFA DHVISGLVGI RPEAGNRLVI NPLLPDNTWD YFCLDGVRYH GRNITVVYDK TGRKYGKGAG LRILVDGTEK ASAPGLSKIT ITI
|
| |