Gene Dfer_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0637 
Symbol 
ID8224206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp735793 
End bp737394 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content58% 
IMG OID644928511 
Producthypothetical protein 
Protein accessionYP_003085065 
Protein GI255034444 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.488669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTAA CCAGACTAGC CTGCATTCTT TTTGGAATAA TACTACTCCC CGGTACCGAG 
GGCCGGGCCC AGCATGCCGT GCTGCAACCC GACCGTTTCA AGTCTTACAT TTCCGCATTC
AACGATTCGG ATGAGGAGAT TTATAAACAA CTCATTCCCA ATTCGAAAGC CTGGGAGTTT
TTGGCTGCAA ACATACCGCT GTTCGAATGT CCCGACAAGC AACTCGAACA AACCTACTAC
TTCCGCTGGT GGACCTACCG GAAACACCTC AAACAGACGC CGGCGGGGTA CATTGTTACT
GAATTCCTGC CGGATGTTCC CTGGGCGGGC AAATACAACT CGATCAACTG TCCGGCTGGC
CATCATTTTT ACGAAGGTCG CTGGCTGCGG GATACCACTT TTTTGAAACA ATACGCTCGG
TTCTGGTTCC GGGGCGGCGC GAGTCCGCGG GCTTATTCAT CGTGGGCGGC CGACGCCATC
CGCGCATACA CGCTCGTGCA CCCCGACAAC GCGTTCCTTA CCGATCTCCT GCCCGACCTC
GTCGCCGACT TCCGCGAATG GGAGAAAACC CACCTCGACT CGACCGGCCT GTTCTGGCAA
ACCGACAACC GCGACGGAAT GGAAATATCC GTATCCGGCG CCTACGGCCG GAAAGACGAG
GGTTACCGCG CCACGATCAA CAGTTATATG TTCGGGAATG CAAAGGCCAT TGCCGACATT
GCCGGACTGG CCGGGAACAC CGGCATGGCC ACGGAGTTCA GCCGCCGTGC CGCGACGATC
AAAAGCCGGA TCATCAGCAG GCTGTGGGAC GACAAGGCCC GGTTTTTCAA GGTAATCCCC
CGGGGCCTGC CTTCCCTCCA ACGCGCCGAT GTGCGCGAAC TGCATGGCTT CACGCCATGG
TATTTTTCAA TTCCCGACAC GAGGCACGCC GCTGCATGGG GGCAGCTGCA CCATCCGCAG
GGCTTCCTGG CGCCCTATGG TCCTACCACC ACCGAGCAGC GGCACCCGGG CTTTCGCATT
GCCTACGAAG GCCACGAATG CCAGTGGAAC GGCCCCAGCT GGCCGTTTTC AACCACCATT
ACCTTAACCG CCCTTGCCAA CCTGCTCAAT AATTATGAGC AATATGCGAT GACAAAAAAT
GATTTTTGGA AGCTGCTCAC CACATACAGC CGCTCGCACC AGCGCATCCG CGAGGACGGA
AAACTCGTCC CCTGGATCGA TGAAAACCTG AACCCCTACA CCGGCGACTG GATTTCCCGC
ACCCGACTGG CCACGATGGA AAACGGCACG TGGTCGAAAG CCAAGGGCGG CCGCGAGCGC
GGTAAGGACT ACAACCATTC GGCATTTGCC GACCACGTGA TTTCAGGGCT CGTGGGCATA
CGGCCCGAAG CTGGCAACCG GCTCGTGATC AACCCATTAC TGCCTGATAA CACCTGGGAT
TACTTCTGCC TCGACGGCGT GCGTTACCAC GGCAGGAACA TTACCGTGGT GTACGACAAA
ACGGGCCGGA AATACGGCAA GGGCGCCGGG CTCCGCATTC TCGTGGACGG CACGGAAAAG
GCGTCCGCGC CCGGTTTAAG CAAAATCACC ATCACCATTT AA
 
Protein sequence
MMVTRLACIL FGIILLPGTE GRAQHAVLQP DRFKSYISAF NDSDEEIYKQ LIPNSKAWEF 
LAANIPLFEC PDKQLEQTYY FRWWTYRKHL KQTPAGYIVT EFLPDVPWAG KYNSINCPAG
HHFYEGRWLR DTTFLKQYAR FWFRGGASPR AYSSWAADAI RAYTLVHPDN AFLTDLLPDL
VADFREWEKT HLDSTGLFWQ TDNRDGMEIS VSGAYGRKDE GYRATINSYM FGNAKAIADI
AGLAGNTGMA TEFSRRAATI KSRIISRLWD DKARFFKVIP RGLPSLQRAD VRELHGFTPW
YFSIPDTRHA AAWGQLHHPQ GFLAPYGPTT TEQRHPGFRI AYEGHECQWN GPSWPFSTTI
TLTALANLLN NYEQYAMTKN DFWKLLTTYS RSHQRIREDG KLVPWIDENL NPYTGDWISR
TRLATMENGT WSKAKGGRER GKDYNHSAFA DHVISGLVGI RPEAGNRLVI NPLLPDNTWD
YFCLDGVRYH GRNITVVYDK TGRKYGKGAG LRILVDGTEK ASAPGLSKIT ITI