Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0619 |
Symbol | |
ID | 8224188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 714350 |
End bp | 716620 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644928494 |
Product | catalase/peroxidase HPI |
Protein accession | YP_003085048 |
Protein GI | 255034427 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.458346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACG GATCAAACGA CATCAGCAAG TGCCCTTTTC ACAATGGGAC AATGAATCAC AATGTAGGCG GCGGCGGTAC CAGGAACCGC GACTGGTGGC CCAACCAGCT GAAACTGAAT ATTCTGCGCC AGCATTCATC CCTATCCAGC CCGATGGGCG AAGATTTCAA TTACGCCGAA GCGTTTAAAA GCCTCGATCT GGAAGCAGTG AAAACAGACC TCCATGCCCT GATGACGGAT TCGCAGGACT GGTGGCCGGC AGATTTCGGA CATTACGGGC CATTATTCAT TCGTATGGCC TGGCATAGCG CGGGTACTTA CCGCGTGTTC GACGGCCGGG GTGGCGGTGG CTCGGGACAG CAGCGGTTTG CGCCGCTCAA CAGCTGGCCC GATAACGTGA GCCTCGACAA GGCCCGTCGC CTGCTTTGGC CTATCAAACA AAAATATGGC AATAAAATCT CCTGGGCCGA CTTACTGATC CTGGCCGGGA ACATCGCATT GGAATCGATG GGTTTCAAGA CATTCGGGTT TGCCGGCGGG CGCGCGGATG TGTGGGAAGC CGACGAAGAT GTATACTGGG GCTCTGAAAA CACCTGGCTG GGTAACGACC GCCGCTATGC CCACGGCCAG CCGGGCCTTG CCGAACCCGG CGTGCTCGTT TCCGACGAAG ATGCCGGTGG AACGACGCAT TCCCGCAACC TGGAAGAACC GCTCGCGGCG GCACACATGG GCCTTATTTA TGTAAATCCC GAAGGACCAG ACGGCAACCC CGACCCGATC GCAGCCGCAA AAGACATTCG TGATACGTTC GGCCGGATGG CGATGAATGA CGAAGAAACC GTGGCGCTCA TTGCCGGCGG CCATAGCTTC GGTAAAACGC ACGGAGCGGC GTCTTCGGAC CATGTTGGTG CGGAACCCGA AGGTGCCGAC CTGGAAAACC AGGGCCTGGG ATGGAGCAAC AGCTTCGGGA CTGGGAAGGG CGCACACACC ATTACCAGCG GCCTGGAAGT GACCTGGACC ACGACGCCCA CCCAATGGAG CAACAACTTT TTCGAAAACC TCTTCGCATT CGAATGGGAG CTTACTAAAA GCCCCGGCGG AGCGCATCAA TGGGTAGCCA AAGATGCAGG TGAAATCATC CCCGACGCGT ACGACGGCAG CAAAAAACAC CGTCCTACCA TGCTTACCAC CGACCTTTCG CTGCGTTTCG ACCCTGCATA TGAGAAAATC TCGCGGCATT TCCTGGAAAA CCCGGATGCA TTCGCCGACG CATTCGCCCG CGCGTGGTTC AAGCTGACGC ACCGCGATAT GGGCCCGCGT GCCCGCTACC TGGGTGCGGA CGTGCCTCAG GAAGTGCTGA TCTGGCAAGA TCCCGTTCCG GCTGTGGACC ATGACCTGGT GACTGACAGC GATATTGCAG GCTTGAAAGC GAATATCCTT GCATCGGGAC TGACCGTGCC GGAGCTGGTG GCAACGGCAT GGGCCTCGGC GTCGACATTC CGTGGTTCGG ATAAGCGCGG CGGCGCAAAC GGTGCCCGCA TTCGTCTGGC GCCTCAGAAG GACTGGAAAG TGAACAATCC GGCACAGCTG CAAAAAGTAC TTCGCACGCT GGAAAGCATT CAGCAGGAGT TTAATGCAAC CACGGGCGGA CGCAAAATCT CCCTCGCCGA CCTGATCGTG CTGGCGGGCA GTGCGGCTGT GGAAAAGGCT GCTCAGGACG CGGGGCACGC CGTCACCGTT CCGTTCACAC CCGGCCGGAC CGACGCATCG CAGGAGCAAA CCGACGTGGA ATCCGTTGGC CACCTCGAAC CGATCGCCGA TGGTTTCCGC AACTACCGCG GCACGAAATT CAAAGTATCC ACCGAGGAAC TGCTGATCGA CAAAGCGCAG TTACTGACGC TCAGCGCACC TGAAATGACG GTATTACTCG GCGGCCTGCG TGTTTTGAAT ATCAACTTCG ACGGATCGAA ACACGGCGTA TTCACACAGC GCCCGGGCGT GCTCACGAAC GATTTCTTTG TAAACCTGCT GGATATGAAC ACAGCATGGA AAGCAATGGG CGATGACCGT GAAACGTACC TCGGAAGCGA CCGCGCCAGC GGCCAGCCCA AATGGACCGC CTCACGCGCC GACCTCGTGT TTGGCTCGCA CGCGGAGCTC CGGGCGATCG CCGAAATCTA CGCGAGCGCC GATTCCGGTG CGAAGTTCGC GAAGGACTTC GTTGCCGCCT GGACCAAGGT CATGAACCTC GACCGTTTCG ACCTGGTCTG A
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Protein sequence | MENGSNDISK CPFHNGTMNH NVGGGGTRNR DWWPNQLKLN ILRQHSSLSS PMGEDFNYAE AFKSLDLEAV KTDLHALMTD SQDWWPADFG HYGPLFIRMA WHSAGTYRVF DGRGGGGSGQ QRFAPLNSWP DNVSLDKARR LLWPIKQKYG NKISWADLLI LAGNIALESM GFKTFGFAGG RADVWEADED VYWGSENTWL GNDRRYAHGQ PGLAEPGVLV SDEDAGGTTH SRNLEEPLAA AHMGLIYVNP EGPDGNPDPI AAAKDIRDTF GRMAMNDEET VALIAGGHSF GKTHGAASSD HVGAEPEGAD LENQGLGWSN SFGTGKGAHT ITSGLEVTWT TTPTQWSNNF FENLFAFEWE LTKSPGGAHQ WVAKDAGEII PDAYDGSKKH RPTMLTTDLS LRFDPAYEKI SRHFLENPDA FADAFARAWF KLTHRDMGPR ARYLGADVPQ EVLIWQDPVP AVDHDLVTDS DIAGLKANIL ASGLTVPELV ATAWASASTF RGSDKRGGAN GARIRLAPQK DWKVNNPAQL QKVLRTLESI QQEFNATTGG RKISLADLIV LAGSAAVEKA AQDAGHAVTV PFTPGRTDAS QEQTDVESVG HLEPIADGFR NYRGTKFKVS TEELLIDKAQ LLTLSAPEMT VLLGGLRVLN INFDGSKHGV FTQRPGVLTN DFFVNLLDMN TAWKAMGDDR ETYLGSDRAS GQPKWTASRA DLVFGSHAEL RAIAEIYASA DSGAKFAKDF VAAWTKVMNL DRFDLV
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