Gene Dfer_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0592 
Symbol 
ID8224161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp672115 
End bp673149 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content56% 
IMG OID644928467 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003085021 
Protein GI255034400 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0122944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAT TGTCAGTAAA CAAAGCACTC CTGTTCCTGT ATTTTGCCGG CCATGCCAAT 
CCCGTACAAA AGCGGCTGAT TGCCGAGTGG CTCGCCCAAG CCGAAAACCA GGAGTTGTAT
TTCGAATGGC TCGCCGAATG GCAGTCGCAG TCGCCGCAGT TCCTGCCCGA CGGCCAGGAG
CGTTACGAGG CCTACGTGCG CTTCATGCGT GAAAACCGGC ACATCGGACC TTCGAACGCC
GCATCGCCTT CCGAAAATGA CGGGCAGCAT TCGGGTACCG CCGCGAAGAG CACGCGCATC
GGCCGCAGGC CCTGGCTGAT GGCCGCCGCA TCGGTGCTCA TGATGGGTAT GACGGCCTGG
TTTGGCCGCG AGCGGATTTT GTACAAAACC TATGCAACCG GGTTTGGTGA AACGCGCTCG
GTACAGCTTT CCGACGGCAC CGGTGTGATT CTGAATGCCA ACACGTCGCT GCGTGTACCG
CGGTTCGGTT TCGGCGAAGC CACCCGCGAG GTGCGACTGA ACGGCGAGGC GTTCTTCAAT
GTCACGCACA CCATCGACAA CAAGCGGTTT ATGGTTAAAA CCGAGGAAAA CTTCGAGGTA
ATGGTGCTGG GGACGGAATT TTCGGTGTAT ACGAGGCAGA AAGGCGGGAA AGTCCTTTTG
AAAAAGGGGA AAGTCCACGT GCTGTTTTCC GAAGGCCGCG AGAAAAAGCA GCTGGTCATG
AAGCCGGGTG ACCTGATGAT GATGGAAAAA GCCGCCGCCA AACCCGTGGT AAAGCCCAAC
GCCGACACTC AGAAGCTAAC CGCCTGGACG GGCAACCGCT TCATTTTCGA TAAAACACCG
CTGTCCGAAG TAGCTACCCA ATTGCAGGAA CATTACGGCA TCCGGGTGGA AATTAAGGAC
AACCGGTTCG CCAACCGCAC CGTGAGCGGC ACATTCCAGC CCGAGAGCGG CGAGGAACTG
CTGACATTGC TTTCCGAGCT ATTCAATTTC CGATTGGCCC GCGAAGGCGA GGCATACCTG
ATTTTACAGA AGTAA
 
Protein sequence
MNTLSVNKAL LFLYFAGHAN PVQKRLIAEW LAQAENQELY FEWLAEWQSQ SPQFLPDGQE 
RYEAYVRFMR ENRHIGPSNA ASPSENDGQH SGTAAKSTRI GRRPWLMAAA SVLMMGMTAW
FGRERILYKT YATGFGETRS VQLSDGTGVI LNANTSLRVP RFGFGEATRE VRLNGEAFFN
VTHTIDNKRF MVKTEENFEV MVLGTEFSVY TRQKGGKVLL KKGKVHVLFS EGREKKQLVM
KPGDLMMMEK AAAKPVVKPN ADTQKLTAWT GNRFIFDKTP LSEVATQLQE HYGIRVEIKD
NRFANRTVSG TFQPESGEEL LTLLSELFNF RLAREGEAYL ILQK