Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0591 |
Symbol | |
ID | 8224160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 671370 |
End bp | 672071 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644928466 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003085020 |
Protein GI | 255034399 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0104382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGAA CGGAGCCGCA TGAAAACGTG CTCGGGCGTT CGGAGGAGGG TAGGAGCGAC CGCGTCCGTC CGGACCGGGT CCATCCAGAC CGGGTCCATC CAGACCGGGT CCATCCAGAC CGGGTCCATC CAGACAAAGA GCTTTTTATC CGCAAGACGT TCGAGGAGAA CCCTGAGGAG GGTTGTGCAT TGCTGTTCAG GCTGTATTAC AGTCCGTTGT GTTCCTATGC CGTGCGGTTT TTGTATTCCA AAGAAGCTGC CGCCGACCTG GTGTCGGAGC TGTTTTATGC TTTCTGGAAA AACCGGTCTT ATGAGTCCGT GAAATCTTCC TACCGGGCCT ACCTGTTCAA GTCCGTTCAG AACAGGGCTT ACAACCTACT GGCCAGCGAC CTCAAAAACA CGGATTCGTT CGAGCAAATG CCCCACTACG ACGTAGCGTC GACTGAGCGG CCCGAGGCGC TGATGTATTT CGAAGAACTC GCCAGCCGCA TCGACCACAT TGTGGAACAG CTACCGCCGC AATGCCAGAA AGTGTTCATG CTCAACCGCT TCGAGAACAA GAAGATCCAG GAGATCGCTG CTGAAATGAA CCTGTCGAGC CGGACCGTCG AAGGGCATAT CAGCAAGGCG CTGAGCATGC TCCGGCAGGG GCTGAAAGAC CACTGGACAT GGCTGCTGCT GCTTGCACCG ATTTTGAATT AA
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Protein sequence | MGGTEPHENV LGRSEEGRSD RVRPDRVHPD RVHPDRVHPD RVHPDKELFI RKTFEENPEE GCALLFRLYY SPLCSYAVRF LYSKEAAADL VSELFYAFWK NRSYESVKSS YRAYLFKSVQ NRAYNLLASD LKNTDSFEQM PHYDVASTER PEALMYFEEL ASRIDHIVEQ LPPQCQKVFM LNRFENKKIQ EIAAEMNLSS RTVEGHISKA LSMLRQGLKD HWTWLLLLAP ILN
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