| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0579 |
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| Symbol | |
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| ID | 8224148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 657149 |
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| End bp | 658237 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928455 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003085009 |
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| Protein GI | 255034388 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.087454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0363138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT TAGTGATTGC GATGGTGGGC GGCATCGTCG CTCTCTCGGC GGCGTCGTGC
CGGAAGCAAG CCAGCCAGCA GGAAGAATCG AAGGCATTCA TGCTGTCGGA TTCGATGATG
CGGCAAATCG TGCTGGACAC GGTGCGCACG GAAACAGTGC GGAACGAGCT CACCCTCGTG
GGGAAGGTCG TGCCGGATGA AAACCGGGTG ATCCGGGTGT TTCCGCTCGT GGGCGGGAAT
GTGGAGGACG TGAAGGTGGA GCTGGGCGAC CATGTGCGCA AAGGGCAGGA ACTGGCCACG
ATCCGCTCCG GCGAGGTGGC CGACCTCGAA CGGCAGATGA TCGAGGCGCA GTCGGATCTG
CTGATCGCGC AGAAGAACCT GTCGTCCACG GAAGACCTTT TCGAAAGCAA GCTCGTTCCC
GAGCGCGACA TGATCACGGC GCGGCAAATG GTGGACAAGG CCCAGGCGGA GCTCGATCGC
GTGAAGGCGA TTTCATCGAT TTACGGCGTT TCAAAGTCGG CCAGCTATGT CGTGCGGGCG
CCGATCGACG GCTTTATTGT GGACAAAAAC GTGAACCGCG GCACGCAGCT GCGCTCCGAC
AATGCTGAAA GCCTTTTCAC CGTGGGGCAA ATCTCCGACG TGTGGGTGAT GGCGAACGTG
AATGAAAGCG ATATTCCCAA AATCCGCCTC GGTATGTCCG CGGACATCAA GACGATCAGC
TTCCCCGACG AAGTCTTCAA AGGCAAAGTG GATAAAATCT ACAACGTGCT CGACCCCGAA
ACGCGGGCGA TGAAAATCCG CATTCAGCTT TCGAACGCGA GTTTCAGGCT GAAACCCGAA
ATGCATGCCA CGGTAAGCCT CAACTTCGAG GAAAACACAC GCATGCAGTC AATCCCGTCG
AAGGCGGTGA TTTTCGATCG CAGCAAAAAC TGGGTGCTGG TGTTCACAAG CCAAAGCAAC
ATCGAAGCCC GCCCGGTGGA CGTTTTCCGC AACCTCTCCA AACGCGCCTA CATCAGCGAA
GGCCTTGCAG ATGGCGAGAT GGTGGTGTCT CATAATCAAT TGCTTATCTA TAATGCGCTT
AATCAATGA
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| Protein sequence | MQKLVIAMVG GIVALSAASC RKQASQQEES KAFMLSDSMM RQIVLDTVRT ETVRNELTLV
GKVVPDENRV IRVFPLVGGN VEDVKVELGD HVRKGQELAT IRSGEVADLE RQMIEAQSDL
LIAQKNLSST EDLFESKLVP ERDMITARQM VDKAQAELDR VKAISSIYGV SKSASYVVRA
PIDGFIVDKN VNRGTQLRSD NAESLFTVGQ ISDVWVMANV NESDIPKIRL GMSADIKTIS
FPDEVFKGKV DKIYNVLDPE TRAMKIRIQL SNASFRLKPE MHATVSLNFE ENTRMQSIPS
KAVIFDRSKN WVLVFTSQSN IEARPVDVFR NLSKRAYISE GLADGEMVVS HNQLLIYNAL
NQ
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