Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0565 |
Symbol | |
ID | 8224134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 641396 |
End bp | 642208 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644928441 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003084995 |
Protein GI | 255034374 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.441314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACGA TCATCAGCAA CGGCACGCCC ATTAGCTACA ACACGTACGG AAGCGGACCC GCGACGCTAC TTTTCGTCCA CGGCTCGTTC ATCGATCAGA CCTACTGGAA AGAACAGGTC GCGTTTTTCA AAGAGAAATA CAAAGTCGTA ACGATGGATT TGGCCGCCCA CGGGCAATCG GGCACGAACC GTTCCGAATG GACGCTCCGC GGCATGGCCG ACGACATTAT CAACCTGATC CGCGCGTTAA ACCTCGAACG GGTAATCCTG ATCGGCCACT CACTCGGCGC GAACCTCATT CTCATGGCCG CAACCACCTA TCCCGATCCG GTGATCGGTT TCATCGCCGT CGACAACTTC AAAAACCTCG CAACGCCGCT TCCGCCCGAG TATGATAGCC AGGTAGAAGA AATCATCGAA AATTCAAAAA AAGCCTACGC CGATACGAAC GAGCATTATG CCCGCATGGT GCTGCTCGGC CCCGAAACCC CGCAATGGAT TATCGACAAG GTAGTGGCCG CTTGCCGCGC GGCGTACGAG CCGATGGGTC AGCAGACCAT GCCGCAATTT TTCATCATGG ACCGCATCGA AAGGGAAGTT CTGCCATTGC TGAGGCCGAA AATGAACCTG ATCAACGTCA ATTACATGCC TACCAACGTA GAAGCGCTTG AAAAGCACGC GGTGAACGGC TACTCGCTCA TCGAAATCGC CGGCACATGC CATTACCCGA TGCTCGAATC GCCCAAAGCG CTGAACGAGG CATTGGACGA GGTGATTGAT GAGGTGCTGC AAGTGAAATT TACGGACAGT TAA
|
Protein sequence | MQTIISNGTP ISYNTYGSGP ATLLFVHGSF IDQTYWKEQV AFFKEKYKVV TMDLAAHGQS GTNRSEWTLR GMADDIINLI RALNLERVIL IGHSLGANLI LMAATTYPDP VIGFIAVDNF KNLATPLPPE YDSQVEEIIE NSKKAYADTN EHYARMVLLG PETPQWIIDK VVAACRAAYE PMGQQTMPQF FIMDRIEREV LPLLRPKMNL INVNYMPTNV EALEKHAVNG YSLIEIAGTC HYPMLESPKA LNEALDEVID EVLQVKFTDS
|
| |