Gene Dfer_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0565 
Symbol 
ID8224134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp641396 
End bp642208 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content54% 
IMG OID644928441 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003084995 
Protein GI255034374 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.441314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGA TCATCAGCAA CGGCACGCCC ATTAGCTACA ACACGTACGG AAGCGGACCC 
GCGACGCTAC TTTTCGTCCA CGGCTCGTTC ATCGATCAGA CCTACTGGAA AGAACAGGTC
GCGTTTTTCA AAGAGAAATA CAAAGTCGTA ACGATGGATT TGGCCGCCCA CGGGCAATCG
GGCACGAACC GTTCCGAATG GACGCTCCGC GGCATGGCCG ACGACATTAT CAACCTGATC
CGCGCGTTAA ACCTCGAACG GGTAATCCTG ATCGGCCACT CACTCGGCGC GAACCTCATT
CTCATGGCCG CAACCACCTA TCCCGATCCG GTGATCGGTT TCATCGCCGT CGACAACTTC
AAAAACCTCG CAACGCCGCT TCCGCCCGAG TATGATAGCC AGGTAGAAGA AATCATCGAA
AATTCAAAAA AAGCCTACGC CGATACGAAC GAGCATTATG CCCGCATGGT GCTGCTCGGC
CCCGAAACCC CGCAATGGAT TATCGACAAG GTAGTGGCCG CTTGCCGCGC GGCGTACGAG
CCGATGGGTC AGCAGACCAT GCCGCAATTT TTCATCATGG ACCGCATCGA AAGGGAAGTT
CTGCCATTGC TGAGGCCGAA AATGAACCTG ATCAACGTCA ATTACATGCC TACCAACGTA
GAAGCGCTTG AAAAGCACGC GGTGAACGGC TACTCGCTCA TCGAAATCGC CGGCACATGC
CATTACCCGA TGCTCGAATC GCCCAAAGCG CTGAACGAGG CATTGGACGA GGTGATTGAT
GAGGTGCTGC AAGTGAAATT TACGGACAGT TAA
 
Protein sequence
MQTIISNGTP ISYNTYGSGP ATLLFVHGSF IDQTYWKEQV AFFKEKYKVV TMDLAAHGQS 
GTNRSEWTLR GMADDIINLI RALNLERVIL IGHSLGANLI LMAATTYPDP VIGFIAVDNF
KNLATPLPPE YDSQVEEIIE NSKKAYADTN EHYARMVLLG PETPQWIIDK VVAACRAAYE
PMGQQTMPQF FIMDRIEREV LPLLRPKMNL INVNYMPTNV EALEKHAVNG YSLIEIAGTC
HYPMLESPKA LNEALDEVID EVLQVKFTDS