| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0561 |
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| Symbol | |
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| ID | 8224130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 635018 |
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| End bp | 636751 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928437 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003084991 |
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| Protein GI | 255034370 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0183863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGA AAAGCAATCG CATAATAAAA AACATAGGAC GCCTGGGTGC CGGAATGCTG
CTGATGGCAA CCGCCGGCTG CACCAACCTG GACGAGGAAC TGTACGACCG TATCACATCC
GAAAACTTCC TTCAAACACG CGAAGACGTG ACCCGCGACT TCCTCCGGGC ATTTGAGCAC
AGCTATTGGA GCATTCAGGG CGGCAACACG TTTATGTTGC AGGAAAACAG CTCCGACGAG
CTCATGACGC CCAATCGCCA GGGCGACTGG TTCGACGGCG GACAGTTCCA ACGCGTGCAT
TACCACACCT GGACACCGAA CGACGGCTTC ACGGCCGATC CATGGAATGC ATTGTACGGC
GGTGTAACGC TCGCGACCAA CTCGCTGGAA GATTTGCAGG GGATCACCGA CCCATCCAGA
TTCGATATGA CCCATGCCGA GCTGGACGGC ATGATCGCCG AGCTCCGCAC GCTCCGCGCG
TGGCTGAACA TCCGCCTGCT GGATTTCTAC CGCAACATCG TGATCGTCAC CAAAGTGAAA
GGTGAAACTG CCGGCGGGCC GCAGGTAACA CCGCAGGAAG CCTTCGCATT CATTGAAAAC
GAACTGAAAG AATCACTTCC AAAACTGCCG ACGGTGCAAA GCCTTGGCGC TAATGCGGTG
GGCCGCTGGA CGCAGGGTGG GGCGGCGTCG CTGCTCGTGC GGTTGTATCT CAATTCCAAA
GTGTACACCG GCACCGACAG GTTTGCCGAC TGTGCTACGC TTTGCCAGGA AATGATCGAT
GGCAAATACG GCACTTACGC GCTCGAATCG CGCTGGGATG CGCCATTTGA CTATAATAAT
GCGACTTCGA AGGAAACGGT GTTCGGCTTC CCGGGCAGCT TCGGGCTCAC GCACTGGCAG
TATGACAGCG GAATGTACTT CTGGATGCTG CCGAACCTTG CGCCGCGCTA CCTCGGATTT
ACCGATTTCG GCGATGCCAA CCCCAAGTAT GCCATGCAGC CGGGGCTGGA TGTGGATGGA
AAAGAATATC CGTTCGCATT GGGCAAGCCA TTCGTGAAGT TTCAGAAATA TCCGGATGAT
GTCCGTTTGA AAAAATACAA AAACCTGGGC AACAGCAAGC GCGAAGGTAT GTTCCTGCAC
GGCTACCTGC CCTACACCAA CTCCGCCGGC AAGCCCGACA CGGTACGCGG TTTCAAAGGT
CCGTACGCGC TGTACCTCCG CGACCAGGTA GGCAAGTTCC TCGACGCAAA ACCAGGCACG
CCGATCGCCG ACAAAACGTC GAATATGAAC AATGCGGACA ACAACTCGGG TATTTTCCCG
GTGAAATATC CGTTCTACCC GAGCGACGAT GTGAACAAGA TCGCATCGGC ATATGCGGAG
ATCCGTTTTG CGGAGATTTA TTACTCGCTG GCTGAATGCA AATACCGTGC AGGTGACAAA
GCGGCTGCGG CGGCATTGCT CAATGCGGTG CGGAAGCGCA ACTACCCGGC CAATTCGCCA
AGCCTTTACA AGGCGAATGG CAGCCAGCTC ACCGACCAGG AAATGCTCGA CGAATGGGGC
CGTGAGTTCC TCGTAGAGGG CCGTCGCCGC ACCGACATGA TCCGCTGGGG CGTGTTCACA
AAAGGCACCT GGTGGGACAA AACGCCGGAT GCCGGCAGCC ACACCGAAAT CTTCCCGATC
GGACAAACGG TGCTGAACTC ATCTCCGCAG CTTAAACAAA ATCCCGGTTA CTAA
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| Protein sequence | MTMKSNRIIK NIGRLGAGML LMATAGCTNL DEELYDRITS ENFLQTREDV TRDFLRAFEH
SYWSIQGGNT FMLQENSSDE LMTPNRQGDW FDGGQFQRVH YHTWTPNDGF TADPWNALYG
GVTLATNSLE DLQGITDPSR FDMTHAELDG MIAELRTLRA WLNIRLLDFY RNIVIVTKVK
GETAGGPQVT PQEAFAFIEN ELKESLPKLP TVQSLGANAV GRWTQGGAAS LLVRLYLNSK
VYTGTDRFAD CATLCQEMID GKYGTYALES RWDAPFDYNN ATSKETVFGF PGSFGLTHWQ
YDSGMYFWML PNLAPRYLGF TDFGDANPKY AMQPGLDVDG KEYPFALGKP FVKFQKYPDD
VRLKKYKNLG NSKREGMFLH GYLPYTNSAG KPDTVRGFKG PYALYLRDQV GKFLDAKPGT
PIADKTSNMN NADNNSGIFP VKYPFYPSDD VNKIASAYAE IRFAEIYYSL AECKYRAGDK
AAAAALLNAV RKRNYPANSP SLYKANGSQL TDQEMLDEWG REFLVEGRRR TDMIRWGVFT
KGTWWDKTPD AGSHTEIFPI GQTVLNSSPQ LKQNPGY
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